Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3010 ATGGATAGTTCAAATGTTCTTGTGGATTGTGGTAGTATTGATGATGAAGGTATAGAAGTTGGCAACTTTAATGTTGAAGAAGAAGATGATGATGCATGCTGGGAGCCTAAAATAGATATGTGTTTTTCTAGCTTAGATGAAGTTAAATCATTTTATAAAGAGTATGCTTTTAGAAAGGGTTTTGAATGGAAGATTAGAACATCGAGAAAAGGACGAGATGGGGAGGTCTGCTACTTAATTCTTGCATGCACAAGAGAAAGGTCTCAAGTGACAAAAAGTCTGTGTACATTGAAGACACGTCCGACAATGGGAAAAAATTGTCCTGCTAAAATTTGTATCAAATTGAAAGAAGATGGATTGTGGTACATTCAGAAATTTGAACCTGATCATTCTCATCATACCAGCCCTAGAAAGGCAAGGTTGTTCAAGGCCAACAAGAAAATGGACTTGCATGTAAGGAGGACAATTGAAATCAATGATGATGCAGGTGTGAGGGTCAACAAGACTTTTCAATCTCTGGTTAAAGATGCAGGAGGGTATGAAAATATTCCATTTAATGAAAGAGATGTAAGGAACTATGTTAACAAGGAACGACGTGCAATTGGAAAAGAAGGTGATGGCAAGGCCTTGATAAGCTATTTTTGTCAAATGAGGGAACAAAATCCTAATTTCTTCTATGAAATAGATTTGGATGATGATTTTCATGTAAAAAATGTGTTTTGGGCTGATGCAAGAAGTAGGGCTGCTTATGAGTATTTTGGAGATGTAGTAACTTTCGATACAACATATCTGACAAATAGATATGATATGCCTTTTGCTGTTTTTGTTGGTGTGAATCACCATGGTCAATCAACATTACTTGGATGTGGGTTGCTATCAGGAGAAGACACAGAATCATTTGAATGGCTTTTTAATTCATGGCTTCGTTGTATGCTAGGAAAGCCTCCTATTGGTATTGTGACCGACCAATGTAAGGCAATGCAAAATGCAATTGAGGCAGTTTTCCCTACAACTCGTCACAGGTGGTGTTTATGGCATATAATGAAAAAAATTGCTGAAAAACTAAGCGGATATGGTGATTATAAAAGGATTAAGTTTGCAATGAAAGAAGCTGTTTATGATACGTTTACAACAGATGATTTTGAAGAGAAATGGTGTTCCTTCATCGAAAAATTTGAGCTTCAAGAGAATCATTGGTTGAGGGGGTTGTATAACGAGCGTCATAGATGGGTACCAACCTTGTTAAGAAAATATTTTTGGGCTGGTATGTCAACAACTCAGCGAAGTGAGAGTATACATGCTTTCTTTGATGGTTATATCAATTCAACGACAAGTCTGAATCAATTTGTAAAACAATATGATAATGCTCTCCGAAGTCGAGCAGAAAAGGAATTTGAAGCAGATTTTACTTCGATGAATACCACAATTTCTTGCGGTTCAAACTCATCAATTGAAAAGCAATTCCAAGGTCAGTACACTCATGCTAAATTTAAGGAGCTTCAAGTTGAATTTAGATCTAAAATGAATTGTGCTTCCTCATTGAACACTGTGGAGGACTGCTTTGCCACATATCATGTGTTGGAGGACGTGTTAGTTGGAGATAGAACAAAAGAACATGTATTTAAAGTTGTGTTTAATCGAGAAAACCATGATGTAAGTTGTGAATGCTCATTGTTTGAATTTAGAGGTATTTTGTGCCGTCATGTGTTATGTGTGTGTGCTCAAGAGAGAGTAAAAAATGTACCAGAGAAGTATGTTTTAACTAAATGGAACAAAAATATTAAAAGGAAGCATACATATATTAAGAGCAGTTATTGTGTGACACAACTGAAGCCACAAATGGACAGGTTTGACAAGTTATGCAAGCACTTCTACGAGGTTGCTGAAATAGCGGCTGAGTTTGAAGACACATCTGTAGACCTCCATGAAATACTACATCAGTTTGCTTCTGATTTACCCACCAGGAATGCTACAGCTGAAAATATTAAAGGAAGTTTCAATGGTGACTCAAATCCAAACAATGGTACAAAAATTCACAGTCCATTGCGGGTAAAACGTAAAGGTCGCCCTCCATCAAAAAGAAAAATATCTATACATGAAAAATTTGCTAAGAGGCCAAGTAATCGACACAAACAGAGTGATGATAGAGGGACTAATGATATCAATACTGAAAGAGTGACAAATCAGTTTGACAGCAACATCTGCATTAAATCATCTCTTGATGTTGTTAGTGGTGGAAATGTGCTGGATGCAAGTACAATGATAGTTAACTAG 2274 0.3654 MDSSNVLVDCGSIDDEGIEVGNFNVEEEDDDACWEPKIDMCFSSLDEVKSFYKEYAFRKGFEWKIRTSRKGRDGEVCYLILACTRERSQVTKSLCTLKTRPTMGKNCPAKICIKLKEDGLWYIQKFEPDHSHHTSPRKARLFKANKKMDLHVRRTIEINDDAGVRVNKTFQSLVKDAGGYENIPFNERDVRNYVNKERRAIGKEGDGKALISYFCQMREQNPNFFYEIDLDDDFHVKNVFWADARSRAAYEYFGDVVTFDTTYLTNRYDMPFAVFVGVNHHGQSTLLGCGLLSGEDTESFEWLFNSWLRCMLGKPPIGIVTDQCKAMQNAIEAVFPTTRHRWCLWHIMKKIAEKLSGYGDYKRIKFAMKEAVYDTFTTDDFEEKWCSFIEKFELQENHWLRGLYNERHRWVPTLLRKYFWAGMSTTQRSESIHAFFDGYINSTTSLNQFVKQYDNALRSRAEKEFEADFTSMNTTISCGSNSSIEKQFQGQYTHAKFKELQVEFRSKMNCASSLNTVEDCFATYHVLEDVLVGDRTKEHVFKVVFNRENHDVSCECSLFEFRGILCRHVLCVCAQERVKNVPEKYVLTKWNKNIKRKHTYIKSSYCVTQLKPQMDRFDKLCKHFYEVAEIAAEFEDTSVDLHEILHQFASDLPTRNATAENIKGSFNGDSNPNNGTKIHSPLRVKRKGRPPSKRKISIHEKFAKRPSNRHKQSDDRGTNDINTERVTNQFDSNICIKSSLDVVSGGNVLDASTMIVN* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3010 757 MobiDBLite consensus disorder prediction 680 694 - -
Mtr5g3010 757 MobiDBLite consensus disorder prediction 661 678 - -
Mtr5g3010 757 SMART 26again6 552 579 IPR006564 GO:0008270
Mtr5g3010 757 MobiDBLite consensus disorder prediction 661 724 - -
Mtr5g3010 757 Pfam MULE transposase domain 256 350 IPR018289 -
Mtr5g3010 757 MobiDBLite consensus disorder prediction 695 721 - -
Mtr5g3010 757 PANTHER OS03G0843700 PROTEIN 30 632 - -
Mtr5g3010 757 Pfam FAR1 DNA-binding domain 50 134 IPR004330 -
Mtr5g3010 757 ProSiteProfiles Zinc finger SWIM-type profile. 541 577 IPR007527 GO:0008270
Mtr5g3010 757 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 30 632 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3010 Mtr-Chr5 38800795 38805010 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr5g3010 MULE 6.3e-34 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3010 - - gmx:102667848 797.734