Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2991 ATGAAACCAATCAAATTCATATTGTCACTTTTACTTATGTTGCTGGCCTCCTCTAGTGCAGAATCAAAATGTAGCAAAACTTGTGACTTAGCTTTAGCATCCTATTATATATGGGAAGGTACAAACTTGACATATATTTCAAACATCATGCAATCCAATGTTGTTTCAAAACCTCTAGATATTTTCAGCTACAATACTGATACTCTACCAAACCTAGATATGCTCCGTTTTTCTTCAAGACTGAATGTTCCATTCCCTTGTGATTGCATTAATGACGAGTTTCTTGGTCACACGTTTTTGTACGAGTTTCACCCAAGAGAGACCTATGCTTCCATTGCTGAGTTGACTTTTAGCAATTTGACCAATAAAGAGTGGATGGAGAAGGTCAATGTTCCTGATTCTGTGAAGGTTAATGTTACTGTTAACTGTTCCTGTGGAGACAAAATGGTTTCCAAGGATTATGGTTTGTTCATAACATATCCTCTTAGTTCTGAGGACACTTTGGAGTCCATTGCGAAGCATACAAAAGTTAAGCCTGAGTTGCTACAGAAGTACAACCCTGGTGTGAATTTCAGCAAAGGAAGTGGGCTGGTTTTTATTCCAGGGAAAGATAAAAATGGAGTTTATGTTCCCTTGCCCCACGGAAAAGCAGGTCATTTAGCTAGGAGTTTAGCTACTGCTGTCGGAGGAACATGCACGGTTCTGTTATTAGCAATTAGTATATATGCTATATACTTTCGAAATAAGAATGCAAAGGAGTCTAAATTGCCATCAAAATATATTGTGGTGGACAAATCACCTAAATTTTCATACGAAGAACTAGCCAATGCTACTGATAAATTCAGCTTGGCTAACAAAATTGGTCAAGGTGGTTTTGGTGAAGTCTACTATGGAGAGCCGAGAGGCAAGAAAACTGCAATAAAAAAGATGAAGATGCAAGCAACAAGGGAATTTCTTGCTGAACTGAAAATCTTAACAAGAGTTCACCACTGCAACCTGGTACACTTGATTGGATATTGTGTTGAGGGATCTCTATTCCTTGTTTATGAATACATCGACAATGGAAACTTAAGCCAAAATCTACATGATTCAGAGAGAGGACCGATGACGTGGTCTACCAGGATGCAAATTGCTCTGGATGTAGCAAGAGGCCTTGAATACATTCATGAGCATTCAGTGCCTGTATACATCCATCGCGACATCAAATCAGATAATATTTTATTAAATGAAAACTTTACTGGGAAGATTGCAGATTTTGGATTAACCAGGCTTACTGATTCTGCAAATTCAACAGATAACACTCTTCATGTGGCTGGCACATTTGGTTACATGCCACCTGAAAATGTATATGGACGTATTTCTCGCAAGATAGATGTATATGCTTTTGGAGTTGTTCTTTATGAACTAATTTCTGCTAAACCAGCTGTGATCAAGATCGATAAAACCGAGTTCGAGAGCGAGATTAGGACCAATGAATCTATTGATGAATACAAGAGCCTTGTAGCTTTGTTTGATGAAGTTATTGATCAAAAGGGAGATCCTATTGAAGGTCTAAGAAATCTGGTGGATCCAAGGCTAGAAGATAATTATTCAATTGATTCCATTAGCAAGATGGCAAAGCTTGCCAGGGCTTGCTTAAACCGAGATCCGAAACGTCGTCCAACAATGAGAGCTGTTGTGGTTTCTCTAATGACACTTAATTCTACAATTGATGATGGAAGTAGGTCAGCCAGTGCAGCATTGAGTACTGTTATGGAGCATGACTCGAAATGA 1773 0.3858 MKPIKFILSLLLMLLASSSAESKCSKTCDLALASYYIWEGTNLTYISNIMQSNVVSKPLDIFSYNTDTLPNLDMLRFSSRLNVPFPCDCINDEFLGHTFLYEFHPRETYASIAELTFSNLTNKEWMEKVNVPDSVKVNVTVNCSCGDKMVSKDYGLFITYPLSSEDTLESIAKHTKVKPELLQKYNPGVNFSKGSGLVFIPGKDKNGVYVPLPHGKAGHLARSLATAVGGTCTVLLLAISIYAIYFRNKNAKESKLPSKYIVVDKSPKFSYEELANATDKFSLANKIGQGGFGEVYYGEPRGKKTAIKKMKMQATREFLAELKILTRVHHCNLVHLIGYCVEGSLFLVYEYIDNGNLSQNLHDSERGPMTWSTRMQIALDVARGLEYIHEHSVPVYIHRDIKSDNILLNENFTGKIADFGLTRLTDSANSTDNTLHVAGTFGYMPPENVYGRISRKIDVYAFGVVLYELISAKPAVIKIDKTEFESEIRTNESIDEYKSLVALFDEVIDQKGDPIEGLRNLVDPRLEDNYSIDSISKMAKLARACLNRDPKRRPTMRAVVVSLMTLNSTIDDGSRSASAALSTVMEHDSK* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2991 590 Gene3D Phosphorylase Kinase; domain 1 251 351 - -
Mtr5g2991 590 Pfam Protein kinase domain 283 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2991 590 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 10 579 IPR044812 GO:0019199|GO:0045087
Mtr5g2991 590 SUPERFAMILY Protein kinase-like (PK-like) 257 563 IPR011009 -
Mtr5g2991 590 ProSitePatterns Protein kinases ATP-binding region signature. 287 309 IPR017441 GO:0005524
Mtr5g2991 590 SMART serkin_6 281 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2991 590 ProSiteProfiles Protein kinase domain profile. 281 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2991 590 Gene3D Transferase(Phosphotransferase) domain 1 352 584 - -
Mtr5g2991 590 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 3 10 579 - -
Mtr5g2991 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2991 Mtr-Chr5 38582943 38586521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2991 4 569 Receptor kinase-like Gene Family AT3G21630 49.261 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mtr5g2991 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2991 - K13429 mtr:MTR_5g086540 1149.42