Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2985 ATGAAACTAAAAAATGGTTTACTATTGTTCTTTATGTTTCTGGAATGTGTTTTTTCCAAAGTAGAGTCCAAGTGTGTGAAGGGGTGTGATGTAGCCTTAGCTTCCTACCATGTCATGCTTCCATTTACGTACCAAAACATAACAAGCTTTATGCAATCAAAGATTGTGTCAGTGTCTAGTTTGTCTGATGTTATAATAAGCTACAATAAAGGCAAAGTATCCAAAAATGGCAATCTTTTTGCCTTTTCTAGAGTCAACATTCCATTCCCATGTGAATGTATTGGAGGTGATTTTCTGGGACATGTATTTGAATACTCAGCAAAAGAAGGAGATACTTATGATTTGATTGCCAATTCTTATTATGCAAGTTTGACTACAGTTGAGCTTTTGAAAAAGTTCAATAGTTATGATCAAGATCATATACCTGCTAAGGCTAAGGTTAATGTAACTGTCAATTGTTCTTGTGGGAACAGCCAGATTTCAAAAGATTATGGCTTGTTTATTACCTATCCACTCAGAACTGATGATACTCTTCAGAAGATTGCAAACCAATCTAATCTTGATGAAGGGTTGATACAGAGTTACAATTCTGGTGTCAATTTCAGCAATGGAAGTGGGATAGTGTTCATTCCAGGAAGAGATCAAAATGGAGATTATGTTCCCTTGTATCCTAGATCAGGTCTTGCTAAGGGTGCAACTGTGGGTATAATAATAGCAGGAATATTTGGACTTCTATTATTAGTTATCTATATATATGTCAGATACTTCAAAAAGAAGGAAGAAGAGAAAACTAAACTGGCTGAAGCACTTTCAACTCAAGATGGTAGTGCAGAGTATGAAACTTCAGGATCCAGTGTGCATGCTACTGTATTTACAGGCATTATGGTGGCAAAGTCAACAGAGTTTTCATATCAAGAACTAGCAAAGGCGACAAATAATTTCAGCTTGGATAATAAAATTGGTCAAGGTGGATTTGGAGCTGTCTATTATGCAGAACTTAGAGGCGAGAAAACAGCAATTAAGAAGATGGATGTGCAAGCATCGTCAGAATTTCTTTGTGAGTTGAAGGTCTTAACACATGTTCATCACTTGAATCTGGTGCGGTTGATTGGATATTGCGTTGAAGGATCACTTTTCCTTGTATATGAACACATTGATAATGGAAACTTGGGTCAATATTTGCATGGTACAGGTAAAGAACCATTGCCATGGTCTAGTAGAGTGGAAATTGCTCTAGATTCAGCAAGAGGCCTTGAATACATTCATGAACATACTGTGCCTATGTATATCCATCGTGATGTAAAATCAGCAAATATATTGATAGACAAAAACTTACGTGGAAAGGTTGCAGATTTTGGCTTGACCAAACTTCTTGAAGTTGGAAACTCCACACTTCAGACTCGTCTTGTCGGAACATTTGGATACATGCCACCAGAATATGCTCAATATGGTGATGTTTCTCCAAAAATAGATGTTTATGCTTTTGGAGTTGTTCTTTTTGAACTTATTTCTGCAAAGAATGCTGTTCTGAAGACAGGTGAATTCGTTGCTGAATCAAGGGGTCTTGTAGCCTTGTTTGAAGAAGCACTTAATCAGACTGATCCTTTAGAAAGTCTTCGCAAACTGGTGGATCCTAGACTTAGAGAAGACTATCCAATTGATTCTGTTCTAAAGATGGCACAACTTGGAAGAGAATGTACAAAAGACAATCCACTACTACGTCCAAGTATGAGATCTATAGTTGTTTCTCTTATGTCACTCTTATCACCTAGTGAAGATTGTGATGGTGACACTTCCGATGAAAATCAAACTATCATAAATCTCTTGTCAGTGAGATGA 1839 0.3692 MKLKNGLLLFFMFLECVFSKVESKCVKGCDVALASYHVMLPFTYQNITSFMQSKIVSVSSLSDVIISYNKGKVSKNGNLFAFSRVNIPFPCECIGGDFLGHVFEYSAKEGDTYDLIANSYYASLTTVELLKKFNSYDQDHIPAKAKVNVTVNCSCGNSQISKDYGLFITYPLRTDDTLQKIANQSNLDEGLIQSYNSGVNFSNGSGIVFIPGRDQNGDYVPLYPRSGLAKGATVGIIIAGIFGLLLLVIYIYVRYFKKKEEEKTKLAEALSTQDGSAEYETSGSSVHATVFTGIMVAKSTEFSYQELAKATNNFSLDNKIGQGGFGAVYYAELRGEKTAIKKMDVQASSEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEHIDNGNLGQYLHGTGKEPLPWSSRVEIALDSARGLEYIHEHTVPMYIHRDVKSANILIDKNLRGKVADFGLTKLLEVGNSTLQTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLFELISAKNAVLKTGEFVAESRGLVALFEEALNQTDPLESLRKLVDPRLREDYPIDSVLKMAQLGRECTKDNPLLRPSMRSIVVSLMSLLSPSEDCDGDTSDENQTIINLLSVR* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2985 612 ProSiteProfiles Protein kinase domain profile. 314 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2985 612 Gene3D Phosphorylase Kinase; domain 1 294 384 - -
Mtr5g2985 612 SUPERFAMILY Protein kinase-like (PK-like) 292 584 IPR011009 -
Mtr5g2985 612 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 3 10 599 - -
Mtr5g2985 612 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Mtr5g2985 612 Pfam Protein tyrosine and serine/threonine kinase 315 583 IPR001245 GO:0004672|GO:0006468
Mtr5g2985 612 Pfam LysM domain 107 144 IPR018392 -
Mtr5g2985 612 Pfam LysM domain 173 201 IPR018392 -
Mtr5g2985 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Mtr5g2985 612 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 10 599 IPR044812 GO:0019199|GO:0045087
Mtr5g2985 612 Gene3D Transferase(Phosphotransferase) domain 1 385 609 - -
Mtr5g2985 612 SMART serkin_6 314 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2985 Mtr-Chr5 38507296 38515905 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2985 1 612 Receptor kinase-like Gene Family AT3G21630 54.153 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mtr5g2985 PK_Tyr_Ser-Thr 5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2985 - K13429 gmx:100776847 916.376