Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2982 ATGAAACCAATCATCAAATTCAGATTATCACTTTTATTCTTGTTACTTGTCTCGCAATCCATCACTTCAGAATCAAAATGTAACAAAACTTGTGACTTAGCTTTAGCTTCCTATTATATAAGGCCAGGTACAACCTTGGCAAATATTTCAAAGGTCATGCAATCCAATGTTGTTTCAAAAGCTGAAGATATTTCCATCTACAACATTTACACAATACTAAGCGTTGATAGTGTCCAAGTCTATACAAGATTGAATGTTCCATTCCCTTGTGATTGCATCAATGATGAGTTTCTTGGTCACACATTTCTCTACAAGCTTCGCCATGGAGACTCCTATGCTTCGATTGCTACGACGACTTTTGGCAATTTGGTCACCGAGGAATGGATCGAGAGAGTCAATGTTTATCCTCGAACCTATGTTCCTGATTCTGTCATGATTAATGTCACTGTTAATTGTTCCTGTGGGAACGGAGAGGTTTCAAAAGATTATGGTTTGTTCATTACATATCCTCTTAGACCTGACGACACTTTGGAATCCATTGCTAAGTATACCAAGGTTAAGGGTGAGTTGCTGCAGAGGTACAACCCTGGTGTCAATTTCAGCCAAGGAAGGGGTCTTGTTTATATTCCAGGGAAAGATGAAAATGGAGTTTATGTTCCCTTGCCCTCTAGAAAAGCAGGTCACTTAGCTAGAAGTTTAGTTGCTGCTGGAATATGTATTCGAGGAGTATGCATGGTTCTGCTATTAGCAATTTGTATATATGTTAGATACTTTCGCAAGAAGAATGGAGAAGAAGAGTCTAAATTGCCACCAGAAGATTCAATGTCACCTTCAACTAAAGATGGTGATAAAGATAGCTATAGTGATACTAGATCCAAATATATATTGGTGGACAAATCACCAAAGTTCTCATACAAAGTACTAGCCAATGCTACAGAGAACTTCAGTTTGGCTAAAAAAATTGGTCAAGGTGGTTTTGGTGAGGTCTACTATGGAGTGCTGGGAGGCAAGAAAGTTGCAATCAAGAAGATGAAGACGCAAGCAACAAGAGAATTTCTTTCTGAACTGAAAGTCTTAACAAGTGTTCGTCACTTAAACCTGGTACACTTGATTGGATATTGTGTTGAGGGATTTCTATTTCTTGTGTATGAATACATGGAAAATGGAAACTTAAGCCAACATCTACATAATTCAGAGAAAGAACTGATGACCTTGTCTAGAAGGATGAAAATTGCTCTGGATGTAGCAAGAGGCCTTGAGTATATTCATGATCATTCGGTGCCTGTATATATCCATCGTGACATAAAATCAGATAATATTTTATTAAATAAAAACTTCAATGGGAAGATTGCAGATTTTGGATTAACCAAGCTGACTAATATCGCAAATTCAACAGATAACACTAATCACATGGCAGGCACATTTGGTTACATGCCGCCCGAAAATGCATACGGGCGTATTTCTCGCAAGATGGATGTGTATGCTTTTGGAGTTGTTCTTTATGAGCTAATTTCTGCTAAAGCAGCCGTGATCATGATCGATAAAAACGAGTTCGAGAGCCATGAGATTAAGACCAATGAATCTACTGATGAGTACAAGAGCCTTGTAGCTTTGTTTGATGAAGTTATGGATCAAAAGGGAGATCCTATAGAAGGTCTAAGAAAGCTGGTGGATCCAAGGCTAGGAGATAACTATTCAATTGATTCCATTAGCAAGATGGCAAAGCTTGCCAAGGCTTGCATAAACCGAGATCCGAAACAACGTCCAAAAATGAGAGATGTTGTGGTTTCTCTTATGAAACTAATTTCTACTATTGATGATGAAAGTAGGACAGATAGCGCAGAGTTGAGTCTTGATGTGGAGCATGATTCAAATTGA 1878 0.3829 MKPIIKFRLSLLFLLLVSQSITSESKCNKTCDLALASYYIRPGTTLANISKVMQSNVVSKAEDISIYNIYTILSVDSVQVYTRLNVPFPCDCINDEFLGHTFLYKLRHGDSYASIATTTFGNLVTEEWIERVNVYPRTYVPDSVMINVTVNCSCGNGEVSKDYGLFITYPLRPDDTLESIAKYTKVKGELLQRYNPGVNFSQGRGLVYIPGKDENGVYVPLPSRKAGHLARSLVAAGICIRGVCMVLLLAICIYVRYFRKKNGEEESKLPPEDSMSPSTKDGDKDSYSDTRSKYILVDKSPKFSYKVLANATENFSLAKKIGQGGFGEVYYGVLGGKKVAIKKMKTQATREFLSELKVLTSVRHLNLVHLIGYCVEGFLFLVYEYMENGNLSQHLHNSEKELMTLSRRMKIALDVARGLEYIHDHSVPVYIHRDIKSDNILLNKNFNGKIADFGLTKLTNIANSTDNTNHMAGTFGYMPPENAYGRISRKMDVYAFGVVLYELISAKAAVIMIDKNEFESHEIKTNESTDEYKSLVALFDEVMDQKGDPIEGLRKLVDPRLGDNYSIDSISKMAKLAKACINRDPKQRPKMRDVVVSLMKLISTIDDESRTDSAELSLDVEHDSN* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2982 625 Gene3D Phosphorylase Kinase; domain 1 286 385 - -
Mtr5g2982 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Mtr5g2982 625 CDD STKc_IRAK 321 601 - -
Mtr5g2982 625 Pfam Protein kinase domain 316 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2982 625 MobiDBLite consensus disorder prediction 265 288 - -
Mtr5g2982 625 ProSiteProfiles Protein kinase domain profile. 315 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2982 625 Gene3D Transferase(Phosphotransferase) domain 1 386 622 - -
Mtr5g2982 625 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 12 614 IPR044812 GO:0019199|GO:0045087
Mtr5g2982 625 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Mtr5g2982 625 SUPERFAMILY Protein kinase-like (PK-like) 288 598 IPR011009 -
Mtr5g2982 625 SMART serkin_6 315 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2982 625 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 3 12 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2982 Mtr-Chr5 38425445 38433083 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2982 5 604 Receptor kinase-like Gene Family AT3G21630 49.191 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mtr5g2982 Pkinase 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2982 - K13429 mtr:MTR_5g086540 832.017