Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2981 ATGGAACAACCATTAAAATTCAGATTATCACTTTTATTCTTGTTACTTGTCTTGCAATCCATCACTTCAGAATCAAAATGTAGCAAAACTTGTGACTTAGCTTTAGCTTCCTATTATATAAGGCCAGGTACAACCTTGGCAAATATTTCAAAGGTCATGCAATCCAATGTTGTTTCAAAAGAAGAAGATATTCTCAGCTACAACACAGCAATTACAAACATAGATGCTATCCAATCCGATACAAGAGTGAATGTTCCCTTCCCTTGTGATTGCATCAATGATGAGTTTCTTGGTCACACATTTCTCTACAAGCTTCGCCTTGGAGATATCTATCCTTCCATTGCTGAGAGGACTTATACAAATTTGACTACCGAGGAGTGGATGGAGAGAGTCAACAGTTATCCTGGAACCGATCTTCCTGTTTCTGCGATGGTTAATGTTACTGTTAACTGTTCCTGTGGGAGCAGAGAGGTTTCTAAGGATTATGGTTTGTTCATCACATACCCTCTTAGTTCTAAGGACACTTTGGAGTCTATTTCTAAGGATACCATGATTGAGGCTGAGTTGCTGCAGAGGTACAACCCTGGTGTCAATTTCAGCCAAGGAAGTGGTCTTGTTTTTATTCCAGGGAAAGATGAAAATGGATTTTATGTTCCCTTACCCCCTAGAAAAGGTCATTTAGCAAGAAGTTTAGGTACAGCTGGAATATCTATTGGAGGATTATGCATGGTTCTGTTATTATTACTTTGTATATATGTTAGATACTTTCGAATGAAGAATGGAGAAGAAAAGTCTAAATTGTCACCAGATGATTCTATGACACCTTCAACTAAAGATGTTGATAAAGATACCAATGGTGATACTGGATCCAGATATATTTGGTTAGACAAATCACCAGAGTTTTCGTACGAAGAACTCGCCAATGCTACAGATAACTTCAGTTTGGCTAAAAAAATTGGTCAAGGTGGTTTTGGTGAGGTCTACTATGGAGAGTTGAGAGGCCAGAAAATTGCAATCAAGAAGATGAAGATGCAAGCAACAAGAGAATTTCTTTCTGAACTGAAAGTGTTAACAAGTGTTCATCACCGGAACCTGGTACACTTGATTGGATATTGTGTTGAGGGATTTCTATTCCTTGTGTATGAATACATGGAAAATGGAAACTTAAACCAACATCTACATAATTCAGAGAAAGAACCGATAACGTTGTCTACAAGGATGAAAATTGCCCTGGATGTTGCGAGAGGCCTTGAGTATATTCATGATCATTCCATTCCTGTATATATCCATCGTGACATAAAATCAGATAATATTCTGTTAAATGAAAACTTCACTGGCAAGGTTGCAGATTTTGGATTAACCAAGCTTACTGATGCTGCAAGTTCAGCAGATAACACTGATCATGTGGCAGGCACATTTGGTTACATGCCACCTGAAAATGCATACGGACGTATTTCTCGCAAGATAGATGTGTACGCTTTTGGAGTTGTTCTTTATGAACTAATTTCTGCTAAAGCAGCAGTGATCAAGATCGATAAAACCGAGTTCGAGTTGAAGAGCCTTGAGATTAAGACCAATGAATCTATTGATGAGTACAAGAGCCTTGTAGCTTTGTTTGATGAAGTTATGGATCAAACGGGAGATCCTATAGAAGGTCTAAGAAAGCTGGTGGATCCAAGGCTAGGATATAACTATTCAATTGATTCCATTAGCAAGATGGCAAAGCTTGCCAAGGCTTGCATAAACCGAGATCCGAAACAACGTCCAAAAATGAGAGACCTTGTGGTTTCTCTTATGAAACTGAATTATACTATTGATGATGAAAGTAGGACAGGTAGCGCAGAGTTGAGTCTTGCTGTGGAGCATGATTCAAATTGA 1878 0.3845 MEQPLKFRLSLLFLLLVLQSITSESKCSKTCDLALASYYIRPGTTLANISKVMQSNVVSKEEDILSYNTAITNIDAIQSDTRVNVPFPCDCINDEFLGHTFLYKLRLGDIYPSIAERTYTNLTTEEWMERVNSYPGTDLPVSAMVNVTVNCSCGSREVSKDYGLFITYPLSSKDTLESISKDTMIEAELLQRYNPGVNFSQGSGLVFIPGKDENGFYVPLPPRKGHLARSLGTAGISIGGLCMVLLLLLCIYVRYFRMKNGEEKSKLSPDDSMTPSTKDVDKDTNGDTGSRYIWLDKSPEFSYEELANATDNFSLAKKIGQGGFGEVYYGELRGQKIAIKKMKMQATREFLSELKVLTSVHHRNLVHLIGYCVEGFLFLVYEYMENGNLNQHLHNSEKEPITLSTRMKIALDVARGLEYIHDHSIPVYIHRDIKSDNILLNENFTGKVADFGLTKLTDAASSADNTDHVAGTFGYMPPENAYGRISRKIDVYAFGVVLYELISAKAAVIKIDKTEFELKSLEIKTNESIDEYKSLVALFDEVMDQTGDPIEGLRKLVDPRLGYNYSIDSISKMAKLAKACINRDPKQRPKMRDLVVSLMKLNYTIDDESRTGSAELSLAVEHDSN* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2981 625 ProSiteProfiles Protein kinase domain profile. 313 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2981 625 SUPERFAMILY Protein kinase-like (PK-like) 288 601 IPR011009 -
Mtr5g2981 625 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 12 614 IPR044812 GO:0019199|GO:0045087
Mtr5g2981 625 Pfam Protein tyrosine and serine/threonine kinase 314 516 IPR001245 GO:0004672|GO:0006468
Mtr5g2981 625 Gene3D Transferase(Phosphotransferase) domain 1 384 620 - -
Mtr5g2981 625 Gene3D Phosphorylase Kinase; domain 1 285 383 - -
Mtr5g2981 625 MobiDBLite consensus disorder prediction 263 285 - -
Mtr5g2981 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Mtr5g2981 625 SMART serkin_6 313 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2981 625 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 3 12 614 - -
Mtr5g2981 625 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2981 Mtr-Chr5 38419749 38423709 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2981 5 601 Receptor kinase-like Gene Family AT3G21630 50.820 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mtr5g2981 PK_Tyr_Ser-Thr 6.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2981 - K13429 mtr:MTR_5g086540 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2563 3 39656726 39665956 Mtr5g2981 5 38419749 38423709 PCT