Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2957 ATGTTAAACATAATGTTCACAAAGCTTCTGTCATTTCAGTTTATTCTCATGATGTTTTTCTGTTCACTTTTATGGCTCTCTACCATCCAAGTTTATGGCATTTTCAGTTTTGCTGCAACTAATGCTACAAAAGATAAAGGTAGTGAAGCAATTGCTCTATTAAATTGGAAAACCAACCTTGACAAACAAAGCCAAGCTTCATTATCTTCTTGGACAACCTTTTCAAGTCCTTGCAATTGGGAAGGAATTGTTTGTGATGAAACAAATTCTGTGACAATTGTAAATGTTGCAAACTTTGGACTTAAAGGTACTCTTTTCAGTCTCAACTTCTCATCTTTTCCTATGCTTCAAACTTTGGATATCAGTTACAACTTTTTTTATGGACCTATTCCACATCAAATTGGTAACTTGTCCAACATTTCTAAACTAAAAATGAGTCATAACCTTTTCAATGGTTCCATTCCTCAAGAAATAGGGAAACTAAGAAATCTAAATCACCTTAATATTGCAACATGTAAGCTCATTGGTTCCATACCCTCAACAATTGGAATGTTGATAAATCTTGTTGAACTTGATTTGTCAGCTAACTATCTCTCAGGCGAAATCCCGTCAATAAAAAACTTGTTGAACTTAGAAAAGCTTGTTCTCTACGGAAACTCTCTTTCTGGACCGATTCCTTTTGAGTTAGGAACAATCTCTTCTCTTAGAACAATTAAATTGTTGCACAATAATTTTTCTGGTGAAATTCCATCTTCCATAGGAAACTTGAAAAACTTGATGATACTTCAGCTTAGTAATAATCAATTTCTTGGATCAATTCCTTCCACTATTGGAAACTTGACAAAACTCATTCAATTGTCAATTTCTGAAAACAAACTTTCTGGATCAATTCCTTCTTCAATAGGAAACTTGATCAATCTAGAAAGGCTTAGTCTTGCACAAAATCATCTTTCTGGACCTATTCCTTCAACCTTTGGAAATTTGACCAAACTAACCTTTCTATTACTTTACACAAACAAGCTTAATGGTAGCATTCCAAAAACAATGAATAACATTACCAATTTGCAAAGTTTGCAATTAAGCTCCAATGATTTCACTGGCCAATTGCCACATCAAATTTGCCTTGGTGGTTCTCTTAGAAATTTTTCTGCTGATAAGAATCAGTTCAGTGGTTTTGTTCCAAGAAGCTTGAAGAATTGTTCAAGCCTTCTTAGACTTAACCTTGCAGAAAATATGTTGATTGGAAATATTTCAGATGATTTTGGTGTGTATCCAAATTTGAGCTACATTTCTTTGAGTGACAATTTTTTGTATGGCCAAATTTTGCCAAATTTGGTAAAAAGTCATAATCTAATTGGCCTAGAGATCTCAAATAACAATTTATCAGGCACTATACCTTCAGAACTAGGACAAGCACCTAAGTTACAAAGTCTTCAACTTTCTTCAAATCATCTAACCGGAAAAATTCCTAAAGAGCTTTGTTACTTAACTTCATTGTATGAACTCTCCTTGAGTAACAATAAACTTTCTGGAAACATTCCTATAGAAATAGGATCCATGCAGGGACTTCAAAAATTGAATCTTGCAGCAAATAATTTAAGTGGATCAATTCCAAAACAAATTGGAAATCTTCTCAAATTAGTTAATTTGAATTTGAGCAATAATAAGTTCATGGAAGGAATTCCCCTTGAATTTAACAGATTGCAATATCTTGAAAATCTTGATCTTGGTGGAAATTCGCTAAATGGAAAAATACCAGAGTCACTTGGAAAGTTGCAAAAGTTGAACACATTGAATCTCTCTCACAATAATCTCTATGGAACCATTCCATCTAATTTTAAGGATTTGATAAGCTTGACAATGGTTGACATATCTTATAACCAATTAGAGGGTTCAATTCCTAACAATCCAGTGTTTCTTAAGGCGCCATTTGAAGCACTTAGAAACAATACAGGTTTATGTGGTAATGCATCAGGCTTGGTACCTTGCAATGACTTGAGTCATAATAACACAAAAAGTAAAAACAAAAGTGCGAAATTGGAATTATGTATTGCTTTGATTATTCTATTTCTTGTAGTCTTCCTGGTTCGTGGCTCTTTACATATTCATTTGCCAAAAGCAAGAAAAATTCAAAAGCAAGCTAGAGAAGAACAAGAACAAACTCAAGATATTTTTTCCATATGGAGTTATGATGGAAAAATGGTTTATGAAAATATCATTGAAGCCACAGAGGATTTTGATGACAAATATCGAATTGGTGAAGGAGGTTCTGGTTCTGTTTACAAGGCCAATTTACCTTCTGGCCAAGTTATTGCTGTGAAAAAACTTCATGCTGAAGTTGATGGTGAAATGCACAATTTCAAGGCTTTTACTAATGAGGTTAAAGCATTGACACAAATCAAACATCGTAACATTGTGAAGTTATATGGATTTTGTTCACATCCACGCCACGCTTTTGTGGTTTATGACTTCCTAGAAGGAGGGAGTTTGGATAATGTGTTAAGCAACGACACACAAGCAACAATGTTTATTTGGAAAAAGAGAGTGAATGTTGTTAAGGGTGTAACAAATGCTCTTTACCATATGCATCATGGTTGCGCTCCTCCTATTGTTCATCGCGACATATCGAGCAAAAATGTTCTTTTAGATTTGGATTGTGAAGCTTACATCTCAGACTTTGGAACAGCTAAGATTCTGAATCTTGATTCACAAAATTCAACAACATTTGCAGGCACTTATGGTTATGCAGCACCAGAGCTTGCATATACTCAGGAAGTGAATGAAAAATGTGATGTGTTTAGTTTTGGAGTGTTATGTTTGGAAATAATAATGGGAAAACATCCAGGGGATCTTATTTTAACATTGTTCTCATCATCTGAAGCACCAATGGCGTATAATTTGCTTTTGAAAGATGTATTAGACACAAGACTTCCACTTCCAGAAAATTCAGTTGCTAAGGATGTGATCTTGATTGCAAAAATGGCATTTGCTTGCTTGAGTGGGAATCCACATTCTCGACCAACTATGAAACAAGCGTATAACATGTTTGTTATGTCAAAATCACCATCAATGGAGACATTCTGCACCATCACTCTTGGTCAACTTCTAGATTAG 3114 0.3443 MLNIMFTKLLSFQFILMMFFCSLLWLSTIQVYGIFSFAATNATKDKGSEAIALLNWKTNLDKQSQASLSSWTTFSSPCNWEGIVCDETNSVTIVNVANFGLKGTLFSLNFSSFPMLQTLDISYNFFYGPIPHQIGNLSNISKLKMSHNLFNGSIPQEIGKLRNLNHLNIATCKLIGSIPSTIGMLINLVELDLSANYLSGEIPSIKNLLNLEKLVLYGNSLSGPIPFELGTISSLRTIKLLHNNFSGEIPSSIGNLKNLMILQLSNNQFLGSIPSTIGNLTKLIQLSISENKLSGSIPSSIGNLINLERLSLAQNHLSGPIPSTFGNLTKLTFLLLYTNKLNGSIPKTMNNITNLQSLQLSSNDFTGQLPHQICLGGSLRNFSADKNQFSGFVPRSLKNCSSLLRLNLAENMLIGNISDDFGVYPNLSYISLSDNFLYGQILPNLVKSHNLIGLEISNNNLSGTIPSELGQAPKLQSLQLSSNHLTGKIPKELCYLTSLYELSLSNNKLSGNIPIEIGSMQGLQKLNLAANNLSGSIPKQIGNLLKLVNLNLSNNKFMEGIPLEFNRLQYLENLDLGGNSLNGKIPESLGKLQKLNTLNLSHNNLYGTIPSNFKDLISLTMVDISYNQLEGSIPNNPVFLKAPFEALRNNTGLCGNASGLVPCNDLSHNNTKSKNKSAKLELCIALIILFLVVFLVRGSLHIHLPKARKIQKQAREEQEQTQDIFSIWSYDGKMVYENIIEATEDFDDKYRIGEGGSGSVYKANLPSGQVIAVKKLHAEVDGEMHNFKAFTNEVKALTQIKHRNIVKLYGFCSHPRHAFVVYDFLEGGSLDNVLSNDTQATMFIWKKRVNVVKGVTNALYHMHHGCAPPIVHRDISSKNVLLDLDCEAYISDFGTAKILNLDSQNSTTFAGTYGYAAPELAYTQEVNEKCDVFSFGVLCLEIIMGKHPGDLILTLFSSSEAPMAYNLLLKDVLDTRLPLPENSVAKDVILIAKMAFACLSGNPHSRPTMKQAYNMFVMSKSPSMETFCTITLGQLLD* 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2957 1037 Pfam Leucine rich repeat N-terminal domain 48 86 IPR013210 -
Mtr5g2957 1037 SUPERFAMILY L domain-like 413 655 - -
Mtr5g2957 1037 ProSitePatterns Protein kinases ATP-binding region signature. 752 775 IPR017441 GO:0005524
Mtr5g2957 1037 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 11 1035 - -
Mtr5g2957 1037 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 11 1035 - -
Mtr5g2957 1037 Gene3D Transferase(Phosphotransferase) domain 1 825 1027 - -
Mtr5g2957 1037 Gene3D Ribonuclease Inhibitor 378 665 IPR032675 -
Mtr5g2957 1037 Gene3D Ribonuclease Inhibitor 238 377 IPR032675 -
Mtr5g2957 1037 ProSiteProfiles Protein kinase domain profile. 746 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2957 1037 Pfam Leucine Rich Repeat 571 592 IPR001611 GO:0005515
Mtr5g2957 1037 Gene3D Ribonuclease Inhibitor 160 237 IPR032675 -
Mtr5g2957 1037 ProSiteProfiles Leucine-rich repeat profile. 187 209 IPR001611 GO:0005515
Mtr5g2957 1037 Gene3D Ribonuclease Inhibitor 48 159 IPR032675 -
Mtr5g2957 1037 ProSitePatterns Tyrosine protein kinases specific active-site signature. 870 882 IPR008266 GO:0004672|GO:0006468
Mtr5g2957 1037 Pfam Protein kinase domain 748 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2957 1037 SUPERFAMILY Protein kinase-like (PK-like) 725 1017 IPR011009 -
Mtr5g2957 1037 SUPERFAMILY L domain-like 61 411 - -
Mtr5g2957 1037 Pfam Leucine rich repeat 258 317 IPR001611 GO:0005515
Mtr5g2957 1037 SMART LRR_typ_2 496 520 IPR003591 -
Mtr5g2957 1037 SMART LRR_typ_2 256 280 IPR003591 -
Mtr5g2957 1037 SMART LRR_typ_2 352 376 IPR003591 -
Mtr5g2957 1037 SMART LRR_typ_2 185 211 IPR003591 -
Mtr5g2957 1037 SMART LRR_typ_2 592 615 IPR003591 -
Mtr5g2957 1037 SMART LRR_typ_2 304 327 IPR003591 -
Mtr5g2957 1037 SMART LRR_typ_2 137 161 IPR003591 -
Mtr5g2957 1037 Gene3D Phosphorylase Kinase; domain 1 706 824 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2957 Mtr-Chr5 38223899 38227388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2957 36 918 Receptor kinase-like Gene Family AT4G08850 43.743 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr5g2957 Pkinase 5.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2957 - - gmx:100800924 1321.22