Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2956 ATGTCATATCATATTACCAAACTTTTTCTATCATCATTCATTCTTTGCAGTTTCTTGCTAGAACACACTGATGCCCTTAGAAAGACATATATTGTATACTTGGGAGGACATTCTCATGGTCCAAATCCCTCCCTTGATGATCTTGACTCAGCCACAAATTCACATTATGATTTACTTGCTTCAATCTTAGGAAGCCATGAGAAGGCAAAGGAAACAGTGATGTACTCTTACAATAAGCATATAAATGGATTTGCTGCACTGCTTGAAGATGAAGAGGCATCAAAGATTGCAAATAATTCAAATGTAGTTTCTGTTTTCTTGAGCAAGGAATATAAATTGCACACTACAAGGTCATGGGACTTTCTTGGACTGGAAAAAGATGGAGGAATTTCTCTTGATTCTGGTTGGTGGAAGGCAAGATTTGGTGAAGATACAATCATGGCTAATTTAGATTCAGGCGTTTGGCCGGAACATGAAAGTTTCAGTGGCATTGGATATGGTCCAGTGCCATCAAAGTGGCATGGAAATGGGGTCTGTGAGATTGATCATTTAATTACACCTTCAAATACAACATTCTGCAACAGAAAGCTAATTGGAGCAAGAATATTTAGCAAAAACTACGAATCACAATTTGGAAAACTCAATCCCTCAAACCTGACAGCACGTGACTTTATTGGCCATGGCACACACACATTATCAACAGCAGCAGGTAACTTTTCACCTGATGTAACAATATTTGGCAACGGTAACGGTACAGCAAAAGGTGGTTCCCCTAGAGCACGTGTAGCATCCTACAAAGTGTGTTGGTCAAAAACAGATGCTGGTGGATGTCATGAAGCTGATATTCTAGCAGCATTTGATCAAGCTATATATGATGGTGTTGATGTGATTTCAAATTCTTTGGGTGGTTCTAGTCCATACATTGAAGCTTTGTTTACTGATGGAATTTCAATTGGGTCATTTCATGCTTTTGCTAAGAATATTGTGGTTGTTTGTTCTGCTGGGAATGATGGACCTGCTCCTAGGAGTGTTACAAATGTTGCACCTTGGTCTTTCACTGTTGCAGCTAGTACAATTGATAGGGAATTTGTTAGCCATATTTCTATTGGTAACAAAAATTACATAAAGGGTGCCAGTCTTAGTAAAGGCTTACCATCAGGACCATCAAAGAAAATATATCAAATGATTCATTCTATCGATGCTAGACTTCTTAATGCCACAATTCAAGATGCTCGTTTTTGCAAGCCTAGAACACTTGATCCTACCAAAGTAAAGGGAAAGATATTAGTTTGTACTCGACTTGAGGGAACAACGTCCGTTGCTCAAGGCTTTGAAGCTGCTCTTGCAGGAGCAGTAGGAGTTTTTGTGATCAATGATGAGAAAAGTGGAAGTTTACTTCTAGCCGAGCCCCATCCTTTACCTGGTGCGAGTATGAATGCCAATGAGGACGAGGATATCGATGAGCGTGAGTGGTTTGGAAAAGGTGGTACTGACGAAAACATTACTAGGAAAATGGTTGCTTACATGTCTGATGCAAGAACATATACAGGATTAAAGCCATCTCCAATTATGGCTGGGTTTTCATCTAGGGGTCCTAGTGCAGTGCAACCATTAATACTCAAGCCTGACATAACTGCTCCTGGAGTGAATATATTAGCTGCTTACTCACTAGCCACCAGTCCATCTAATCTACCATCAGATACACGCCGCGTTCCTTACAATCTGCAACAAGGAACTTCAATGTCTTGTCCTCATGTTGCTGGCATTGTCGGTCTTCTCAAGACACTTCATCCTAGTTGGAGTCCAGCTGCCATCAAATCTGCCATCATGACTACCGCTACCACACTAGATAACACCAATCAACCAATCAGAGATGCATTCGATAAGATAGCGACTCCATTTGAATATGGTTCCGGACATATTCAGCCTAACCTCGCAATGGATCCAGGACTCGTTTATGATATAAGCACAACCGATTACTTGAACTTCATTTGTGTTTTTGGTCACAATCACAATTTACTAAAGTTCTTTAATTACAACTCTTACATTTGTCCTGAGTTTTACAACATTGAAAATCTCAATTATCCTTCAATTACTGTGTATAATCGAGGACCGAACCTTATAAATGTTACTCGTACCGTCACAAATGTTGGGTCTCCTAGCACATATGTTGTGGAAATTCAACAACTTGAAGAATTTAAGGTTCATGTTCAACCAAGTTCATTGACTTTTAAGGAAATTGGAGAAAAGAAAACCTTTCAAGTAATTCTAGAGGCAATAGGTATGCCTCCTCATGGTTTTCCAGTATTTGGGAAATTGACTTGGACAAATGGCAACCATAGAGTAACTAGTCCTATTGTAGTTCTGTAA 2370 0.3954 MSYHITKLFLSSFILCSFLLEHTDALRKTYIVYLGGHSHGPNPSLDDLDSATNSHYDLLASILGSHEKAKETVMYSYNKHINGFAALLEDEEASKIANNSNVVSVFLSKEYKLHTTRSWDFLGLEKDGGISLDSGWWKARFGEDTIMANLDSGVWPEHESFSGIGYGPVPSKWHGNGVCEIDHLITPSNTTFCNRKLIGARIFSKNYESQFGKLNPSNLTARDFIGHGTHTLSTAAGNFSPDVTIFGNGNGTAKGGSPRARVASYKVCWSKTDAGGCHEADILAAFDQAIYDGVDVISNSLGGSSPYIEALFTDGISIGSFHAFAKNIVVVCSAGNDGPAPRSVTNVAPWSFTVAASTIDREFVSHISIGNKNYIKGASLSKGLPSGPSKKIYQMIHSIDARLLNATIQDARFCKPRTLDPTKVKGKILVCTRLEGTTSVAQGFEAALAGAVGVFVINDEKSGSLLLAEPHPLPGASMNANEDEDIDEREWFGKGGTDENITRKMVAYMSDARTYTGLKPSPIMAGFSSRGPSAVQPLILKPDITAPGVNILAAYSLATSPSNLPSDTRRVPYNLQQGTSMSCPHVAGIVGLLKTLHPSWSPAAIKSAIMTTATTLDNTNQPIRDAFDKIATPFEYGSGHIQPNLAMDPGLVYDISTTDYLNFICVFGHNHNLLKFFNYNSYICPEFYNIENLNYPSITVYNRGPNLINVTRTVTNVGSPSTYVVEIQQLEEFKVHVQPSSLTFKEIGEKKTFQVILEAIGMPPHGFPVFGKLTWTNGNHRVTSPIVVL* 790
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2956 789 Gene3D - 360 516 - -
Mtr5g2956 789 ProSitePatterns Serine proteases, subtilase family, serine active site. 578 588 IPR023828 -
Mtr5g2956 789 Gene3D - 664 789 - -
Mtr5g2956 789 Gene3D Peptidase S8/S53 domain 144 660 IPR036852 GO:0004252|GO:0006508
Mtr5g2956 789 CDD Peptidases_S8_3 111 614 IPR034197 -
Mtr5g2956 789 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 18 789 IPR045051 -
Mtr5g2956 789 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Mtr5g2956 789 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Mtr5g2956 789 PRINTS Subtilisin serine protease family (S8) signature 577 593 IPR015500 -
Mtr5g2956 789 SUPERFAMILY Subtilisin-like 113 651 IPR036852 GO:0004252|GO:0006508
Mtr5g2956 789 ProSiteProfiles Serine proteases, subtilase domain profile. 118 647 - -
Mtr5g2956 789 Pfam Fibronectin type-III domain 692 788 IPR041469 -
Mtr5g2956 789 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 114 IPR037045 -
Mtr5g2956 789 Pfam Peptidase inhibitor I9 29 114 IPR010259 -
Mtr5g2956 789 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 18 789 - -
Mtr5g2956 789 Pfam Subtilase family 142 618 IPR000209 GO:0006508|GO:0008236
Mtr5g2956 789 CDD PA_subtilisin_like 367 486 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr5g2956 Mtr-Chr5 38214544 38219979 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2956 29 788 Subtilisin-like Serine Gene Family AT2G04160 52.094 0.0 768
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2956 - - gmx:100794135 1205.66