LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr5g2956	ATGTCATATCATATTACCAAACTTTTTCTATCATCATTCATTCTTTGCAGTTTCTTGCTAGAACACACTGATGCCCTTAGAAAGACATATATTGTATACTTGGGAGGACATTCTCATGGTCCAAATCCCTCCCTTGATGATCTTGACTCAGCCACAAATTCACATTATGATTTACTTGCTTCAATCTTAGGAAGCCATGAGAAGGCAAAGGAAACAGTGATGTACTCTTACAATAAGCATATAAATGGATTTGCTGCACTGCTTGAAGATGAAGAGGCATCAAAGATTGCAAATAATTCAAATGTAGTTTCTGTTTTCTTGAGCAAGGAATATAAATTGCACACTACAAGGTCATGGGACTTTCTTGGACTGGAAAAAGATGGAGGAATTTCTCTTGATTCTGGTTGGTGGAAGGCAAGATTTGGTGAAGATACAATCATGGCTAATTTAGATTCAGGCGTTTGGCCGGAACATGAAAGTTTCAGTGGCATTGGATATGGTCCAGTGCCATCAAAGTGGCATGGAAATGGGGTCTGTGAGATTGATCATTTAATTACACCTTCAAATACAACATTCTGCAACAGAAAGCTAATTGGAGCAAGAATATTTAGCAAAAACTACGAATCACAATTTGGAAAACTCAATCCCTCAAACCTGACAGCACGTGACTTTATTGGCCATGGCACACACACATTATCAACAGCAGCAGGTAACTTTTCACCTGATGTAACAATATTTGGCAACGGTAACGGTACAGCAAAAGGTGGTTCCCCTAGAGCACGTGTAGCATCCTACAAAGTGTGTTGGTCAAAAACAGATGCTGGTGGATGTCATGAAGCTGATATTCTAGCAGCATTTGATCAAGCTATATATGATGGTGTTGATGTGATTTCAAATTCTTTGGGTGGTTCTAGTCCATACATTGAAGCTTTGTTTACTGATGGAATTTCAATTGGGTCATTTCATGCTTTTGCTAAGAATATTGTGGTTGTTTGTTCTGCTGGGAATGATGGACCTGCTCCTAGGAGTGTTACAAATGTTGCACCTTGGTCTTTCACTGTTGCAGCTAGTACAATTGATAGGGAATTTGTTAGCCATATTTCTATTGGTAACAAAAATTACATAAAGGGTGCCAGTCTTAGTAAAGGCTTACCATCAGGACCATCAAAGAAAATATATCAAATGATTCATTCTATCGATGCTAGACTTCTTAATGCCACAATTCAAGATGCTCGTTTTTGCAAGCCTAGAACACTTGATCCTACCAAAGTAAAGGGAAAGATATTAGTTTGTACTCGACTTGAGGGAACAACGTCCGTTGCTCAAGGCTTTGAAGCTGCTCTTGCAGGAGCAGTAGGAGTTTTTGTGATCAATGATGAGAAAAGTGGAAGTTTACTTCTAGCCGAGCCCCATCCTTTACCTGGTGCGAGTATGAATGCCAATGAGGACGAGGATATCGATGAGCGTGAGTGGTTTGGAAAAGGTGGTACTGACGAAAACATTACTAGGAAAATGGTTGCTTACATGTCTGATGCAAGAACATATACAGGATTAAAGCCATCTCCAATTATGGCTGGGTTTTCATCTAGGGGTCCTAGTGCAGTGCAACCATTAATACTCAAGCCTGACATAACTGCTCCTGGAGTGAATATATTAGCTGCTTACTCACTAGCCACCAGTCCATCTAATCTACCATCAGATACACGCCGCGTTCCTTACAATCTGCAACAAGGAACTTCAATGTCTTGTCCTCATGTTGCTGGCATTGTCGGTCTTCTCAAGACACTTCATCCTAGTTGGAGTCCAGCTGCCATCAAATCTGCCATCATGACTACCGCTACCACACTAGATAACACCAATCAACCAATCAGAGATGCATTCGATAAGATAGCGACTCCATTTGAATATGGTTCCGGACATATTCAGCCTAACCTCGCAATGGATCCAGGACTCGTTTATGATATAAGCACAACCGATTACTTGAACTTCATTTGTGTTTTTGGTCACAATCACAATTTACTAAAGTTCTTTAATTACAACTCTTACATTTGTCCTGAGTTTTACAACATTGAAAATCTCAATTATCCTTCAATTACTGTGTATAATCGAGGACCGAACCTTATAAATGTTACTCGTACCGTCACAAATGTTGGGTCTCCTAGCACATATGTTGTGGAAATTCAACAACTTGAAGAATTTAAGGTTCATGTTCAACCAAGTTCATTGACTTTTAAGGAAATTGGAGAAAAGAAAACCTTTCAAGTAATTCTAGAGGCAATAGGTATGCCTCCTCATGGTTTTCCAGTATTTGGGAAATTGACTTGGACAAATGGCAACCATAGAGTAACTAGTCCTATTGTAGTTCTGTAA	2370	0.3954	MSYHITKLFLSSFILCSFLLEHTDALRKTYIVYLGGHSHGPNPSLDDLDSATNSHYDLLASILGSHEKAKETVMYSYNKHINGFAALLEDEEASKIANNSNVVSVFLSKEYKLHTTRSWDFLGLEKDGGISLDSGWWKARFGEDTIMANLDSGVWPEHESFSGIGYGPVPSKWHGNGVCEIDHLITPSNTTFCNRKLIGARIFSKNYESQFGKLNPSNLTARDFIGHGTHTLSTAAGNFSPDVTIFGNGNGTAKGGSPRARVASYKVCWSKTDAGGCHEADILAAFDQAIYDGVDVISNSLGGSSPYIEALFTDGISIGSFHAFAKNIVVVCSAGNDGPAPRSVTNVAPWSFTVAASTIDREFVSHISIGNKNYIKGASLSKGLPSGPSKKIYQMIHSIDARLLNATIQDARFCKPRTLDPTKVKGKILVCTRLEGTTSVAQGFEAALAGAVGVFVINDEKSGSLLLAEPHPLPGASMNANEDEDIDEREWFGKGGTDENITRKMVAYMSDARTYTGLKPSPIMAGFSSRGPSAVQPLILKPDITAPGVNILAAYSLATSPSNLPSDTRRVPYNLQQGTSMSCPHVAGIVGLLKTLHPSWSPAAIKSAIMTTATTLDNTNQPIRDAFDKIATPFEYGSGHIQPNLAMDPGLVYDISTTDYLNFICVFGHNHNLLKFFNYNSYICPEFYNIENLNYPSITVYNRGPNLINVTRTVTNVGSPSTYVVEIQQLEEFKVHVQPSSLTFKEIGEKKTFQVILEAIGMPPHGFPVFGKLTWTNGNHRVTSPIVVL*	790

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr5g2956	789	Gene3D	-	360	516	-	-
	Mtr5g2956	789	ProSitePatterns	Serine proteases, subtilase family, serine active site.	578	588	IPR023828	-
	Mtr5g2956	789	Gene3D	-	664	789	-	-
	Mtr5g2956	789	Gene3D	Peptidase S8/S53 domain	144	660	IPR036852	GO:0004252\|GO:0006508
	Mtr5g2956	789	CDD	Peptidases_S8_3	111	614	IPR034197	-
	Mtr5g2956	789	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	18	789	IPR045051	-
	Mtr5g2956	789	PRINTS	Subtilisin serine protease family (S8) signature	142	161	IPR015500	-
	Mtr5g2956	789	PRINTS	Subtilisin serine protease family (S8) signature	223	236	IPR015500	-
	Mtr5g2956	789	PRINTS	Subtilisin serine protease family (S8) signature	577	593	IPR015500	-
	Mtr5g2956	789	SUPERFAMILY	Subtilisin-like	113	651	IPR036852	GO:0004252\|GO:0006508
	Mtr5g2956	789	ProSiteProfiles	Serine proteases, subtilase domain profile.	118	647	-	-
	Mtr5g2956	789	Pfam	Fibronectin type-III domain	692	788	IPR041469	-
	Mtr5g2956	789	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	17	114	IPR037045	-
	Mtr5g2956	789	Pfam	Peptidase inhibitor I9	29	114	IPR010259	-
	Mtr5g2956	789	PANTHER	SUBTILISIN-LIKE SERINE PROTEASE	18	789	-	-
	Mtr5g2956	789	Pfam	Subtilase family	142	618	IPR000209	GO:0006508\|GO:0008236
	Mtr5g2956	789	CDD	PA_subtilisin_like	367	486	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr5g2956	Mtr-Chr5	38214544	38219979	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr5g2956	29	788	Subtilisin-like Serine Gene Family	AT2G04160	52.094	0.0	768

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr5g2956	-		-	gmx:100794135	1205.66