Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2949 ATGGAATACCTTTATGGATTTGCATCTGCTATTTCGAGAGATTTGGTGTGCGGTGTGATAGGTCAATTAAGTTATCCGTGCTGCTTCAACAATTTTGTTCAAGACCTTGCAAAAGAAGAAAGTAATTTGGCTGCAATAAGAGATAGTGTCCAAGACCGCGTCACACGAGCCAAGAAGCAAACTAGAAAGACTGCTGAGGTTGTTGAGAAGTGGTTAAAGGATGCTAACATTGCCATGGACAATGTTGATCAGTTACTACAAATGGCAAAATCAGAGAAGAACTCATGTTTCGGGCACTGTCCAAATTGGATTTGGCGATACAGCGTAGGCAGGAAGTTATCAAAGAAAAAAAGGAACCTTAAATTGTACATTGAAGAAGGTAGACAGTATATAGAGATCGAACGCCCTGCTTCACTTTCAGCAGGCTATTTTTCTGCTGAAAGATGTTGGGAGTTTGATAGTAGAAAACCTGCTTATGAAGAACTTATGTGTGCTTTGAAAGATGACGATGTTACTATGATTGGATTGTATGGGATGGGGGGTTGTGGTAAAACAATGCTTGCAATGGAAGTAGGCAAGAGGTGTGGTAATCTTTTTGATCAAGTGCTTTTTGTGCCTATATCTAGTACTGTAGAAGTGGAAAGGATCCAAGAAAAAATTGCAGGCTCTCTCGAATTTGAATTCCAAGAAAAAGACGAAATGGACAGATCAAAACGCTTATGCATGAGGTTAACACAAGAAGATAGGGTTCTTGTGATTCTGGACGACGTGTGGCAAATGCTAGATTTTGATGCCATAGGGATTCCTTCTATTGAACATCATAAAGGTTGCAAGATTCTCATTACCAGTAGATCTGAAGCAGTTTGTACTTTGATGGATTGCCAGAAAAAAATTCAGTTATCAACACTAACCAACGATGAAACGTGGGATCTTTTCCAAAAGCAAGCACTGATATCTGAAGGAACTTGGATTTCTATAAAGAATATGGCTAGAGAAATTTCAAATGAATGTAAAGGCTTGCCTGTCGCCACTGTAGCAGTGGCTAGCAGCTTGAAAGGCAAGGCTGAGGTGGAATGGAAGGTGGCATTGGATAGATTGAGAAGTTCAAAACCTGTTAATATTGAAAAAGGTTTGCAAAACCCGTACAAGTGCTTGCAACTAAGCTATGATAATTTGGACACTGAAGAGGCCAAGTCACTTTTCTTGTTGTGTTCTGTATTTCCTGAAGATTGTGAAATTCCTGTGGAGTTTTTAACTAGGTCTGCAATCGGGCTTGGCATAGTTGGAGAAGTTCACTCATATGAAGGGGCAAGGAACGAAGTAACTGTGGCTAAAAATAAGCTCATAAGTTCTTGTTTGTTGCTAGATGTTAATGAAGGAAAATGTGTCAAAATGCATGACTTAGTTCGCAATGTAGCCCATTGGATTGCGGAGAATGAGATCAAGTGTGCCTCAGAAAAGGATATTATGACTTTGGAACATACTTCATTAAGATATCTATGGTGTGAGAAATTTCCAAATAGTTTGGATTGTTCCAATCTTGACTTTTTACAGATTCACACATATACACAGGTATCAGATGAAATTTTCAAGGGAATGAGAATGCTTAGAGTTTTGTTTCTTTACAACAAGGGTCGGGAGAGAAGGCCATTGTTGACTACATCATTAAAATCATTGACGAATCTTCGTTGCATACTCTTCAGTAAGTGGGATTTAGTTGATATCTCATTTGTGGGAGATATGAAGAAACTTGAAAGTATTACATTGTGTGATTGTTCCTTCGTTGAATTACCTGATGTGGTTACACAATTGACAAACTTAAGATTGTTGGATTTGTCAGAATGTGGCATGGAAAGGAATCCGTTTGAAGTGATTGCGAGACACACAGAGCTGGAAGAACTGTTCTTTGCTGACTGTAGATCGAAATGGGAAGTTGAATTCTTAAAAGAGTTTAGTGTCCCCCAAGTGTTACAGAGGTATCAAATACAATTAGGAAGCATGTTTTCCGGTTTCCAGGACGAGTTTCTCAATCATCACAGAACTTTGTTTCTGAGTTATTTGGATACATCTAATGCCGCGATCAAGGATTTGGCCGAAAAGGCAGAGGTCTTGTGTATAGCAGGTATTGAGGGAGGTGCTAAAAATATTATCCCTGACGTATTTCAAAGTATGAATCATTTAAAAGAGCTTCTGATACGTGATTCTAAGGGGATAGAATGTTTGGTTGACACTTGTCTGATCGAGGTAGGAACTCTTTTCTTCTGCAAGTTGCATTGGCTAAGGATTGAGCACATGAAGCATTTGGGAGCTTTATACAATGGTCAAATGCCTCTTAGTGGTCATTTTGAGAATCTAGAAGACCTATATATAAGTCATTGTCCAAAGCTAACACGTCTCTTCACACTTGCAGTTGCTCAAAATCTGGCGCAACTGGAAAAATTACAAGTATTATCTTGTCCTGAACTTCAGCATATACTAATCGATGATGATAGAGATGAGATAAGTGCATATGATTACAGACTACTGTTGTTTCCAAAATTAAAAAAGTTCCATGTTAGAGAGTGTGGTGTGCTGGAATACATAATCCCAATCACTTTGGCTCAAGGCCTTGTACAATTGGAGTGTTTGGAAATTGTATGTAATGAGAATTTGAAATACGTATTTGGTCAAAGCACACACAATGATGGTCAGAATCAAAATGAACTCAAGATCATCGAGCTTTCAGCCCTGGAAGAGCTTACTCTTGTTAACTTGCCAAATATCAATAGCATTTGTCCAGAAGATTGTTATCTAATGTGGCCATCCCTGCTTCAATTCAATTTGCAAAATTGTGGAGAGTTTTTCATGGTGTCTATCAATACTTGCATGGCTTTACACAACAATCCGAGAATCAATGAAGCTTCACACCAAACTTTGCAAAATATAACAGAAGTTCGAGTCAATAACTGTGAGTTAGAAGGTATCTTTCAGCTAGTAGGACTAACCAATGATGGAGAAAAAGATCCACTGACATCGTGTTTGGAAATGTTGTATTTGGAGAATCTACCTCAGCTCAGGTATTTATGCAAGAGTAGCGTAGAATCAACAAACCTCCTATTCCAAAATCTTCAACAAATGGAGATAAGTGGATGTAGAAGATTAAAATGTATCTTCTCATCCTGTATGGCAGGAGGGCTACCTCAATTGAAAGCGCTAAAGATAGAAAAGTGCAATCAGCTCGATCAAATCGTTGAGGATATTGGCACTGCATTTCCCTCAGGATCATTTGGTCTTCCCAGCCTTATAAGGTTAACACTAATATCATGTCCGATGCTGGGTTCATTGTTCATAGCGTCCACTGCTAAAACCTTGACTTCATTGGAAGAATTGACAATACAAGATTGCCATGGTTTAAAGCAATTAGTAACTTATGGAAGAGATCAGAAAAATAGACGGGGAGAAATAGTTCAGGATGATCATGACTTTCAGAGTTTTACATCAATGTTCCAAAGTTTGAAAAAGATTAGTGTTATGAGATGTCATCTGCTCAAGTGTATATTACCCATTTCATTTGCAAGAGGACTGGTAAAATTGGAAGCTATAGAAATCACAGACACTCCTGAGTTGAAATATATATTTGGCCATTGTTCCCATCAATATCCAAACAAGTACCAAATTGAGCTTCCGGTTTTGGGAAAAGTTGCACTCTACGATATACCAAATATGATTGCCATTTGTCCAGAAAACTACCATGCAACATGCTCGTCTTTGCAACTTCTTGTCATGAACGATGTTAGTCTATCAATGAATAATTTGATGGTTGATTCTGTAGCCACACACTCCGATCTTAGTTCTGATAAAACAGACGAAGGAGAAACAAGTATGAGTATTGAGAAGAAGTTAATGTCTTTTATTATTGAGAACGGATCAGAAATTGAAGGCATATTTCAAATGAAGGGATTCCCAAGTGAGAATGGACAACAAGTGATATCTTGGTTAGAAGACCTTAAGTGTGTCAATTTGCCAAAGCTAATGTATATATGGATGGGTGCCAAACATAGTTTGAGCCTTCAACATCTTCACAAAATAAACATTTGCAATTGTCCAAAACTAAAGTCTATCTTCTCCATTTCTGTCTTGAGAGTCCTGCCTCTGTTGAAGATCCTAGTGGTAGAACAGTGTGATGAATTGGATCAAATCATTGAAGATGACGCTGAAGAAAATGAAAATGTCCAGAGTCCTCAAGTTTGCTTCTCACAGCTAAAGTTTCTTCTTGTCACACACTGTAACAAATTGAAGCATTTGTTTTATATCCGCACATCCCATGTGTTTCCAGAACTGGAATATCTGACCCTCAATCAAGACTCTAGTCTAGTTCATTTGTTTAAAGTTGGTCTTGGTGCGAGAGATGGGAGAGTGGAAGTTTCGCTTCCGAAACTGAAACATGTAATGCTAATGCAACTGCCAAACTTTAATAATATATGTCAAGGGATTGTTGAGTTTCAGACTCTGACCAATCTTTTGGTGCACAATTGTCCAAAATTCTCAATAACTTCAACAACTACTGTTGAGGACATGCTACAAAGCTTTGATCGGGACAAGGAATTTGATTTCTATCTCCGTCCCCACTTACACGACATAAGTTGTACAACAAACGGACACGTGTTTCTTACATCGAAGAACAAAAACAAAGAGATACAAGATTTAGAATCACAGGAGCAGAAACTGTCCCCTATTCCTTTACCAAACTTGACAGAGGAGTTGGTTAAGGAACATTCAATGGCTGAACCGTGTTTGAACCAACAAAAGCCACTTGGAGAATCTAGGGTTACTGAAGAGGGAACAGAATCAATGAATGCGGAGACAGTAGCTTCGTCAATTCTTTCTGAATCCGATAGTTCACATTCATGCTCATTAGCTACATCTCAATGTAGACTGCATTCACATTATGAAATCAGCTTCAGCCAAACTGAGACTTACACAAATAAAGAAAACGAAGTCCACCCTATATATATAGGAGAAGACTTGGGGGCCAATGATCTCAATCCTATGGAAGAGTATGATGAAGGCCAAATAACCACACTTTGTGTTTCTGAAGTGACTGCAGATAACTTAGTTGCAAAGGCCCTTTCTGACCTGGAAGAGTCTTTGAGGATGCCTCTGAAGGACATAGCTAGCTCAGAGGCTAACAGCCTTTGCCTTCTAACGGCGCTTAACTTCTTGTCCCACCTTTCTTTACAAGATGCAGCTCTATCAGATGGACTTCAAGCTATAATAGACACTATGCACACAGAATTCCCAAGCATCCTATGCTCTTTCAAGCATGCCTTTATTACCATAGACAAATTTTCTGTGACCGAAGCTCAACACGATGAGGCAGCCATTACTCTTTCTTCCAAAATTTCCAAAGCAAACAGTTCCTTGGATGATGCTCAACAGAGGGAAGCGGCTTTAAAGGAACAGATCATTCAATTGGAGAAAGAAATAATACATCTTCAAGAGGAGAAGGATAAATGCATTCAAGAAACTATAGGCTACAAAACTGAGCTGGAGAATTTGAGGAAAGACAAAAATCAAATTGTGGAAGATCAAATGAAAGCTCGGCAACAAATATTTGAGGTCGATTATAAATGGTCTGCTCTACGTAGTCAGTTTCAATACAACCACATTATTGCAAGAAATCCTTCTTGA 5670 0.3862 MEYLYGFASAISRDLVCGVIGQLSYPCCFNNFVQDLAKEESNLAAIRDSVQDRVTRAKKQTRKTAEVVEKWLKDANIAMDNVDQLLQMAKSEKNSCFGHCPNWIWRYSVGRKLSKKKRNLKLYIEEGRQYIEIERPASLSAGYFSAERCWEFDSRKPAYEELMCALKDDDVTMIGLYGMGGCGKTMLAMEVGKRCGNLFDQVLFVPISSTVEVERIQEKIAGSLEFEFQEKDEMDRSKRLCMRLTQEDRVLVILDDVWQMLDFDAIGIPSIEHHKGCKILITSRSEAVCTLMDCQKKIQLSTLTNDETWDLFQKQALISEGTWISIKNMAREISNECKGLPVATVAVASSLKGKAEVEWKVALDRLRSSKPVNIEKGLQNPYKCLQLSYDNLDTEEAKSLFLLCSVFPEDCEIPVEFLTRSAIGLGIVGEVHSYEGARNEVTVAKNKLISSCLLLDVNEGKCVKMHDLVRNVAHWIAENEIKCASEKDIMTLEHTSLRYLWCEKFPNSLDCSNLDFLQIHTYTQVSDEIFKGMRMLRVLFLYNKGRERRPLLTTSLKSLTNLRCILFSKWDLVDISFVGDMKKLESITLCDCSFVELPDVVTQLTNLRLLDLSECGMERNPFEVIARHTELEELFFADCRSKWEVEFLKEFSVPQVLQRYQIQLGSMFSGFQDEFLNHHRTLFLSYLDTSNAAIKDLAEKAEVLCIAGIEGGAKNIIPDVFQSMNHLKELLIRDSKGIECLVDTCLIEVGTLFFCKLHWLRIEHMKHLGALYNGQMPLSGHFENLEDLYISHCPKLTRLFTLAVAQNLAQLEKLQVLSCPELQHILIDDDRDEISAYDYRLLLFPKLKKFHVRECGVLEYIIPITLAQGLVQLECLEIVCNENLKYVFGQSTHNDGQNQNELKIIELSALEELTLVNLPNINSICPEDCYLMWPSLLQFNLQNCGEFFMVSINTCMALHNNPRINEASHQTLQNITEVRVNNCELEGIFQLVGLTNDGEKDPLTSCLEMLYLENLPQLRYLCKSSVESTNLLFQNLQQMEISGCRRLKCIFSSCMAGGLPQLKALKIEKCNQLDQIVEDIGTAFPSGSFGLPSLIRLTLISCPMLGSLFIASTAKTLTSLEELTIQDCHGLKQLVTYGRDQKNRRGEIVQDDHDFQSFTSMFQSLKKISVMRCHLLKCILPISFARGLVKLEAIEITDTPELKYIFGHCSHQYPNKYQIELPVLGKVALYDIPNMIAICPENYHATCSSLQLLVMNDVSLSMNNLMVDSVATHSDLSSDKTDEGETSMSIEKKLMSFIIENGSEIEGIFQMKGFPSENGQQVISWLEDLKCVNLPKLMYIWMGAKHSLSLQHLHKINICNCPKLKSIFSISVLRVLPLLKILVVEQCDELDQIIEDDAEENENVQSPQVCFSQLKFLLVTHCNKLKHLFYIRTSHVFPELEYLTLNQDSSLVHLFKVGLGARDGRVEVSLPKLKHVMLMQLPNFNNICQGIVEFQTLTNLLVHNCPKFSITSTTTVEDMLQSFDRDKEFDFYLRPHLHDISCTTNGHVFLTSKNKNKEIQDLESQEQKLSPIPLPNLTEELVKEHSMAEPCLNQQKPLGESRVTEEGTESMNAETVASSILSESDSSHSCSLATSQCRLHSHYEISFSQTETYTNKENEVHPIYIGEDLGANDLNPMEEYDEGQITTLCVSEVTADNLVAKALSDLEESLRMPLKDIASSEANSLCLLTALNFLSHLSLQDAALSDGLQAIIDTMHTEFPSILCSFKHAFITIDKFSVTEAQHDEAAITLSSKISKANSSLDDAQQREAALKEQIIQLEKEIIHLQEEKDKCIQETIGYKTELENLRKDKNQIVEDQMKARQQIFEVDYKWSALRSQFQYNHIIARNPS* 1890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2949 1889 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 404 IPR027417 -
Mtr5g2949 1889 Coils Coil 1843 1863 - -
Mtr5g2949 1889 Gene3D - 388 475 IPR036388 -
Mtr5g2949 1889 Gene3D Ribonuclease Inhibitor 476 658 IPR032675 -
Mtr5g2949 1889 Coils Coil 72 92 - -
Mtr5g2949 1889 Gene3D Ribonuclease Inhibitor 1150 1459 IPR032675 -
Mtr5g2949 1889 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 23 946 - -
Mtr5g2949 1889 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1349 1509 - -
Mtr5g2949 1889 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 973 1106 - -
Mtr5g2949 1889 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1115 1369 - -
Mtr5g2949 1889 SUPERFAMILY L domain-like 459 888 - -
Mtr5g2949 1889 Gene3D - 146 299 IPR027417 -
Mtr5g2949 1889 PANTHER - 23 946 - -
Mtr5g2949 1889 PANTHER - 1115 1369 - -
Mtr5g2949 1889 PANTHER - 973 1106 - -
Mtr5g2949 1889 PANTHER - 1349 1509 - -
Mtr5g2949 1889 Gene3D Ribonuclease Inhibitor 904 1145 IPR032675 -
Mtr5g2949 1889 Gene3D Ribonuclease Inhibitor 659 832 IPR032675 -
Mtr5g2949 1889 Pfam NB-ARC domain 163 391 IPR002182 GO:0043531
Mtr5g2949 1889 SUPERFAMILY RNI-like 1011 1258 - -
Mtr5g2949 1889 PRINTS Disease resistance protein signature 173 188 - -
Mtr5g2949 1889 PRINTS Disease resistance protein signature 244 258 - -
Mtr5g2949 1889 PRINTS Disease resistance protein signature 337 351 - -
Mtr5g2949 1889 PRINTS Disease resistance protein signature 602 618 - -
Mtr5g2949 1889 SUPERFAMILY RNI-like 1320 1523 - -
Mtr5g2949 1889 Coils Coil 1794 1835 - -
Mtr5g2949 1889 CDD AAA 176 286 - -
Mtr5g2949 1889 Gene3D - 302 387 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2949 Mtr-Chr5 38116811 38124841 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2949 170 615 WRKY Transcription Factor Family AT5G45050 24.260 7.94e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2949 - - cam:101501248 3021.49