Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2926 ATGGAAATAGAATTACTTTCAAGAGAAACCATCAAACCTTCATCACCAACTCCATCTCACCTCAAACTTTACCCACTTTCATTCATAGACAACATTATTTTCAGAAACTATGCGCCATTGCTTTATTTTTACAACCCAAACAAGAGTATAGACCAAAATTCAAAAATATCACAACTTCGAAAATCCTTATCTCAACTTCTATCCAAATACTATCCTTTTGCTGGTAGGATTAAAGATAGAATTACCATTGAATGTAATGACCAAGGGGTGTTGTTTTTAGTCACAAAGATAAAAAACAAACTTTCAGAGATTCTTCAAAATCCTACTGAAAAATTGTTGAACCCTTTGTTCCCTGATGAATTACAATGGAAAGAAATGGATTGGAGAGCAAGTTTTATAGCCATTCAAATAAATTGGTTTACATGTGGAGGAATGGTAATAAGTATTTGCATGACTCACAAAATTGGTGATGCTTCAACCATTTTCAAATTCATGAATGATTGGGCCATTATCAACCAAAAGATAGAGGAAGATAAAAAAGAGTTATTAGTATCACCCTTGAGTTTACTTGATGCAGGGGCAACAATTTTTCCACAAAGGGATTTGCCTATCTTCCCAGAAATGGTGATAAAGAAAGAAAACAATGTCGTATTTAAAAGGTTTGTTTTTCAACCTGCAATGATTAAGTCTCTTAAGGCAATGGTGACTTCTAGTTCCATGCATTCTCCCACGCAAGTACAAGTTGTAACTGCATGGATTTACAAGCATGCCGTTTCAATAATGGGGTTAAATTTCCAGACGGCAATGTTTAGCATGATTGTCGATCTTCGTAGAAGAATGGTTCCTCCATTGTCTGAACATTGTGTAGGGAACATATTTTGGTTTTCGTCTATGTTGGCAAATAAGAAGGAAATGGAACTAGAAGATTTGGTCTGCCAGATAAAAGAAGGGTTATCTGAATGTTGTAACGTTTATCCAAAATTATTTAGAGAGAAAGAGAACAATAATATATCTGAATGCTTGAAGCAAGTTACAGAACCTTATTCCGAGAATAAAAATTTGTTTACGTTTAGTAGTTGGTGTAGGTTTCCAATGTATGAAGCAGATTTTGGATGGGGAAAACCAATATGGATCACCACTACTGGTTTGTCTTCAAGGAATATTATATTTTTGATGGATACAAGAGATGGAGATGGGATTGAAGCGATTGTGAACATGGAAGATAATTATATGGCTAAGTTTGAACATGAATTTGAGCTTCTTCAATATGCGTCTTTTAATCCAAACAATGCTAGACATGATGTAATACCCTCAAAATTGTAA 1323 0.3439 MEIELLSRETIKPSSPTPSHLKLYPLSFIDNIIFRNYAPLLYFYNPNKSIDQNSKISQLRKSLSQLLSKYYPFAGRIKDRITIECNDQGVLFLVTKIKNKLSEILQNPTEKLLNPLFPDELQWKEMDWRASFIAIQINWFTCGGMVISICMTHKIGDASTIFKFMNDWAIINQKIEEDKKELLVSPLSLLDAGATIFPQRDLPIFPEMVIKKENNVVFKRFVFQPAMIKSLKAMVTSSSMHSPTQVQVVTAWIYKHAVSIMGLNFQTAMFSMIVDLRRRMVPPLSEHCVGNIFWFSSMLANKKEMELEDLVCQIKEGLSECCNVYPKLFREKENNNISECLKQVTEPYSENKNLFTFSSWCRFPMYEADFGWGKPIWITTTGLSSRNIIFLMDTRDGDGIEAIVNMEDNYMAKFEHEFELLQYASFNPNNARHDVIPSKL* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2926 440 PANTHER F21J9.9 5 430 - -
Mtr5g2926 440 Gene3D - 1 204 IPR023213 -
Mtr5g2926 440 Pfam Transferase family 1 420 - -
Mtr5g2926 440 Gene3D - 213 425 IPR023213 -
Mtr5g2926 440 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2926 Mtr-Chr5 37825441 37826763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2926 1 415 Monolignol Biosynthesis Gene Families AT5G48930 23.111 5.60e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2926 - - mtr:MTR_5g084900 585.104