Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2925 ATGGAAATAGAATTACTTTCAAGAGAAACCATCAAACCTTCATCACCAACTCCTTCTCACCTTAAACTTTATCCACTTTCTTTCATAGACAACATTGTTTGCAGTAACTATCTGCCATTACTTTACTTTTACAACCCAAACGGAAATAGAGATCAAAATTCAAAAACATCACAACTCCGAAAATCCTTATCTCAACTTCTATCTAAATACTATCATTTTGCTGGTAGGATTAAAGATAAAATTACCATTGAATGTAATGATCAAGGTGTGTTATTTTTGGTCACAAAGGTAAAAAACAAACTTTCAGAGATTGTTCAAAATCCCACTGAAAAATTGTTAAACCCTTTGTTCCCTGATGAATTACAATGGAAAGAAATGGATTGGAGAGCGAGTTTTATAGCCATTCAAGTAAATTGGTTTGCATGCGGAGGAATGGTAATAAGTATTTGCATTAGTCACAAAATTGGTGATGCTGCAACCATTTTCAACTTCATGAATGATTGGGCCATTATCTACCAAAAGTTTGATGAAGATGAAAAAGATTTATTAAGTTTACTTGATGCAGGGGGGACAATTTTTCCACAAAGGGATTTACCTATTTTCCCAGAAAATGTGTTAAAGAGAGAAAACAATGTTGAGTTTAAAAGGTTTGTTTTTCAACCTGCGATGATCAAGTCTCTTAAGGCAATGGTAACTTCTAGTTCCATGCCTTCTCCCACACGCGTGCAAGTTGTAATTGCATGGATTTACAAGCATGCTGTATCAATAATGGGGTTAAATTTCCAGACGGCTTCGTTTTACATGGTTGTGAATCTACGCAAAAGAATGGTTCCTCCGTTGTCTGAAAAATGTGTAGGGAACATACTTTGGTTTTCGTCTATGATGATGACAAATAAGAAGGAAATGAAACTAGAAGAGTTGGTATGCAAAATAAAAGAAGGGTTATCTGAATGTTGTGACGTTTATCCTAAAATGTTTAGAGAGATAGGGAAAAACAATTTGTTGATATCTGAGTGCTTGAAGCAAGCTACAGAACCTCAATCCGAAAATAAAAATGTGTTTGGTTTTAGTAGTTGGTGTAGGTTTCCAATGTATGAAGCAGATTTTGGATGGGGAAAACCAATATGGATCACCACTACTGGTTGTTCTTCAAAGAATAATATTCTTCTAATGGATACAAGAGATGGAGATGGCATTGAAGCTGTTGTGAACATGGAAGAGAAATATATGGCTAAATTTGAACATGATTTTGAGCTTCTTCAATATGCCTCTCTTAATCCAAACAATGTTGGAAGTGATGACTGTGTGCTCCGTTCTTGA 1320 0.3508 MEIELLSRETIKPSSPTPSHLKLYPLSFIDNIVCSNYLPLLYFYNPNGNRDQNSKTSQLRKSLSQLLSKYYHFAGRIKDKITIECNDQGVLFLVTKVKNKLSEIVQNPTEKLLNPLFPDELQWKEMDWRASFIAIQVNWFACGGMVISICISHKIGDAATIFNFMNDWAIIYQKFDEDEKDLLSLLDAGGTIFPQRDLPIFPENVLKRENNVEFKRFVFQPAMIKSLKAMVTSSSMPSPTRVQVVIAWIYKHAVSIMGLNFQTASFYMVVNLRKRMVPPLSEKCVGNILWFSSMMMTNKKEMKLEELVCKIKEGLSECCDVYPKMFREIGKNNLLISECLKQATEPQSENKNVFGFSSWCRFPMYEADFGWGKPIWITTTGCSSKNNILLMDTRDGDGIEAVVNMEEKYMAKFEHDFELLQYASLNPNNVGSDDCVLRS* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2925 439 Pfam Transferase family 1 419 - -
Mtr5g2925 439 Gene3D - 210 424 IPR023213 -
Mtr5g2925 439 PANTHER F21J9.9 5 430 - -
Mtr5g2925 439 Gene3D - 1 200 IPR023213 -
Mtr5g2925 439 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2925 Mtr-Chr5 37820112 37821591 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2925 1 414 Monolignol Biosynthesis Gene Families AT5G48930 22.449 2.20e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2925 - - mtr:MTR_5g084900 555.444