Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2886 ATGAATCTAAGCTTCCATAGTTTCTTCTTCCTTTTGCTCTTTACAATCTTTTTCTTTTCCACCTTATCTTTTGGAGCCACTCTTTCCAAAGATGAAGTGGAGGTTCTTAAAGATATAGCTAAGACACTTGGAAAGAAAGATTGGGATTTCAGTGTAGATCCATGTAGTGGAGAACGTAATTGGACATCTTCTGTTCAAGTGAAAGGGAGTGAAAATGCTGTCACATGCAATTGTACCTTTGTCAATGCCACTGTTTGTCATGTGACTAACATACTTTTGAAACAACAAAATCTCCCGGGCACTCTCCCAAAGGAATTGGTCAGGTTGCCTTATCTTCAAGAAATTGACCTTTCCCGCAATTACTTGAATGGTACAATTCCTGATGAATGGGGCTCCATGAATCTCGTTAACATCTCTCTCATTGGAAATCGATTAACTGGTAAAATACCAATAGCTATAACAAACATATCCACTCTACAAAGTTTGGTGTTGGAGTCCAATCAATTCTCTGGAAATCTTCCTCCTGAGTTTGGGAATCTAACCCAAATTCAAAGAGTGCTAATTTCTTCCAACAATTTCACTGGAGAACTACCTGCTACATTGGCCAAACTCACCACATTGCAGGATATTCGAATTCAAGACAATCAATTCTCTGGGAAGATACCTGATTTTATTCAAAGCTGGACAAGTCTCACTAAATTAATCATTGAAGGGAGTGGATTAAGTGGGCCAATTCCTTCTGGAATTTCAAAATTGGAAAAATTAACTGACTTGAGAATCAGTGATTTAAGTGGATCTGAATTTTCACCTTTTCCACAACTTAAGGATTTGAAATTGAAAACTTTGATTCTAAGGAATTGCAACATCAATGGAACACTGCCTGAATACCTTGGGACAATGACTACTCTAAAAAACTTAGATCTCAGTTTCAACAAATTGAGTGGACCAATTCCAAGTAACTATGATCCCCTAAGAAAAGTGGATTACATATATTTAACTGGAAACCTTCTCACTGGACCTGTTCCTGCATGGACACAAAAAGCAGACAACCTAGATATTTCTTACAATAACTTCACTATAAGCCAAGGGAGTCAGCCATGTCAAGATGGAAATGTGAACTATTTTTCTAGCTCTTTGACCCGCAACGAATCAGGAGTGGTTTCATGTTTGAAAAGCTTTGTCTGTCCTAAAACCTCATATGCTCTTCGTATAAATTGTGGTGGAAAGTCGGTGACAGTAAATGGAAGCACATACGATGATGATTCAGATACAGCAGCGCCAGCTAGATTCCACCAGAGTGGAACAAATTGGGGATTTAGCACCACTGGCAACTTCATGGATAACGACGGTGGAGACTACTATACCTGGTCGAATAGATCTAAGCTTTCTATAGCCAATGCTGAACTATACACGAATGCACGAGTTTCTCCCACATCTTTGACTTATTACGGATTTTGCATGGCAAATGGAAACTACACAGTAAATCTACAGTTTGCAGAAATCATGTTTACTAATGATCAAACATTTAACAGCTTAGGAAGGCGTGTATTCGATATCTATATCCAGGGAAAGCTAGTAAAAAAGGACTTTGATATAGCAAAAGAAGCAGGAGGAGTTGATAAGGAAGTCACAAAACCATTCACTGCTGTTGTGACCGATAGTACTTTGGAGATTCGCTTATATTGGGCTGGAAAAGGGACAACTGGTATACCATTTAGATCAGTATATGGCCCTCTTATTTCAGCTATATCTGTTCAATCAGATTTTCCAGCTCCTTCTGAAAATGGAAGCAGCATATCTATAGGAGCTGTTGTTGGAATTGTGGCTGCAGTAGTAATTGTTATCATCCTATTATTTGGTATTCTTTGGTGGAAAGGCTGTTTTGGAAAGAAAAGCTCTTTAGAAAATGAGGTAAAGGGTTTAAACCTACAAATGAGTTTATTTAACGTGAGACAAATCAAAGGAGCAACAAATAACTTCGATATTTCTAATAAGATTGGTGAAGGAGGATTTGGTCCAGTATACAAGGGACGTCTATCAGATGGAACATTGATAGCAGTTAAGCTACTTTCCTCTAAATCAAAGCAAGGGAATCGCGAATTTTTAAATGAAATCGGCATGATCTCGGCTTTGCAACACCCTCATCTTGTTAAACTCTATGGATGCTGTGTGGAGGGAGATCAGTTAATGTTGATATATGAATATTTGGAAAATAACAGTCTTGCTCGTGCTTTATTTGGGCCTGCAGAACACCAAATAAGATTGGATTGGCCAACAAGATACAAGATTTGTGTTGGTATTGCTAGAGGTTTAGCATATCTACATGAAGAATCAAGATTGAAGGTTGTTCACAGAGACATTAAAGCCACTAATGTGTTACTTGATAAAGATCTCAATCCGAAGATATCTGATTTTGGTTTGGCCAAGCTCGATGAAGAGGAGAACACTCACATTAGCACTCGAATAGCCGGGACATATGGATATATGGCTCCAGAATATGCCATGCATGGTTATTTGACCGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGCATTGGAAATCTTACATGGAAGTAACAATACAATTCTTAGACAAAAAGAAGAAGCATTCCATCTTCTTGATTGGGCACATATCTTGAAAGAGAAAGGAAATGAAATAGAGCTAGTAGATAAAAGATTGGGTTCAAATTTCAACAAAGAAGAAGCAATGCTAATGATAAATGTGGCACTCTTATGCACTAATGTGACTTCATCACTTAGGCCAGCAATGTCTTCAGTGGTAAGCATGTTAGAAGGTAAAATTGCTATTCAAGAACTGGTTTTAGAATCAAGTGAGGTATTGGATGAGAAGAAAATGGAAGCAATGAGAAAACATTACCAAGACCAAAGTATTTCAATGGAAGGGCCATGGACTGCTTCATCTTCTTCAGTAACTACTGATCTTTATCCTGTAAACCTAGATTCTTCTTACTTGAAGAATAGAGATTAA 2991 0.3778 MNLSFHSFFFLLLFTIFFFSTLSFGATLSKDEVEVLKDIAKTLGKKDWDFSVDPCSGERNWTSSVQVKGSENAVTCNCTFVNATVCHVTNILLKQQNLPGTLPKELVRLPYLQEIDLSRNYLNGTIPDEWGSMNLVNISLIGNRLTGKIPIAITNISTLQSLVLESNQFSGNLPPEFGNLTQIQRVLISSNNFTGELPATLAKLTTLQDIRIQDNQFSGKIPDFIQSWTSLTKLIIEGSGLSGPIPSGISKLEKLTDLRISDLSGSEFSPFPQLKDLKLKTLILRNCNINGTLPEYLGTMTTLKNLDLSFNKLSGPIPSNYDPLRKVDYIYLTGNLLTGPVPAWTQKADNLDISYNNFTISQGSQPCQDGNVNYFSSSLTRNESGVVSCLKSFVCPKTSYALRINCGGKSVTVNGSTYDDDSDTAAPARFHQSGTNWGFSTTGNFMDNDGGDYYTWSNRSKLSIANAELYTNARVSPTSLTYYGFCMANGNYTVNLQFAEIMFTNDQTFNSLGRRVFDIYIQGKLVKKDFDIAKEAGGVDKEVTKPFTAVVTDSTLEIRLYWAGKGTTGIPFRSVYGPLISAISVQSDFPAPSENGSSISIGAVVGIVAAVVIVIILLFGILWWKGCFGKKSSLENEVKGLNLQMSLFNVRQIKGATNNFDISNKIGEGGFGPVYKGRLSDGTLIAVKLLSSKSKQGNREFLNEIGMISALQHPHLVKLYGCCVEGDQLMLIYEYLENNSLARALFGPAEHQIRLDWPTRYKICVGIARGLAYLHEESRLKVVHRDIKATNVLLDKDLNPKISDFGLAKLDEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEILHGSNNTILRQKEEAFHLLDWAHILKEKGNEIELVDKRLGSNFNKEEAMLMINVALLCTNVTSSLRPAMSSVVSMLEGKIAIQELVLESSEVLDEKKMEAMRKHYQDQSISMEGPWTASSSSVTTDLYPVNLDSSYLKNRD* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2886 996 SMART serkin_6 660 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2886 996 Pfam Malectin domain 401 583 IPR021720 -
Mtr5g2886 996 SUPERFAMILY Protein kinase-like (PK-like) 644 943 IPR011009 -
Mtr5g2886 996 Gene3D Ribonuclease Inhibitor 275 383 IPR032675 -
Mtr5g2886 996 Gene3D Ribonuclease Inhibitor 192 274 IPR032675 -
Mtr5g2886 996 Gene3D Phosphorylase Kinase; domain 1 628 735 - -
Mtr5g2886 996 Gene3D Transferase(Phosphotransferase) domain 1 736 946 - -
Mtr5g2886 996 Gene3D - 397 588 - -
Mtr5g2886 996 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 290 359 - -
Mtr5g2886 996 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 75 289 - -
Mtr5g2886 996 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 381 953 - -
Mtr5g2886 996 SUPERFAMILY L domain-like 82 359 - -
Mtr5g2886 996 Gene3D Ribonuclease Inhibitor 30 191 IPR032675 -
Mtr5g2886 996 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 75 289 - -
Mtr5g2886 996 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 381 953 - -
Mtr5g2886 996 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 290 359 - -
Mtr5g2886 996 ProSiteProfiles Protein kinase domain profile. 660 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2886 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Mtr5g2886 996 Pfam Leucine rich repeat 278 337 IPR001611 GO:0005515
Mtr5g2886 996 CDD STKc_IRAK 666 933 - -
Mtr5g2886 996 Pfam Protein tyrosine and serine/threonine kinase 662 928 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2886 Mtr-Chr5 37407611 37416119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2886 26 961 Receptor kinase-like Gene Family AT1G53420 57.400 0.0 1052
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr5g2886 PK_Tyr_Ser-Thr 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2886 - - gmx:732563 1495.72