Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2883 ATGGCTTCGTTTTGTTTTAGCATGACAAGTAATTTAATGATATGTTTTTCCCTTTTGGTTCTTGTATCAATTGGGAGTGCCAATGCTAATCTTTCGAAAGATTATTACTATAGTTCTTGTCCAAAACTATTTGAAACTGTTAAGTGTGAAGTTCAATCTGCCATATCAAAAGAGACTCGCATGGGTGCTTCTCTTCTGCGTTTGTTCTTCCACGATTGCTTTGTTAATGGATGTGATGGTTCAATTCTTCTCGATGACACATCAAGCTTCACCGGAGAGAAAACTGCCAATCCCAACAAAAATTCGGCCCGTGGATTCGAAGTGATCGACAAAATCAAATCAGCAGTGGAGAAAGTATGTCCAGGTGCAGTTTCATGCGCTGACATCCTTACCATCACTGCTAGAGACTCTGTTGAGATCCTTGGAGGCCCAACATGGGATGTGAAACTTGGAAGAAGAGATGCAAGAACAGCTAGTAAATCAGCTGCAAACAATGACATCCCAGCACCCACTTCAAGCCTCAACCAACTCATCTCAAGGTTTAATGCTCTTGGTCTTTCCACCAAGGATTTGGTCGCATTGTCTGGGGGTCACACAATTGGACAAGCAAGGTGCACTACATTTAGAGCCCACATTTACAACGACTCCAACATAGATACTTCCTTTGCTCGCACAAGGCAATCAGGGTGCCCCAAGACATCGGGTTCCGGGGACAATAATTTGGCACCCCTTGATCTTGCAACACCAACATCCTTTGACAACCATTACTTCAAGAACCTAGTTGACAGTAAGGGACTACTCCACTCCGACCAACAACTCTTTAATGGTGGATCCACCGATTCCATAGTGCACGAATATAGCTTGTATCCAAGCTCTTTTTCCTCTGATTTCGTCACCGCCATGATCAAGATGGGAGACATTAGTCCCCTCACCGGTTCAAATGGAGAGATAAGAAAGCAATGCAGGAGCGTGAATTAA 978 0.4366 MASFCFSMTSNLMICFSLLVLVSIGSANANLSKDYYYSSCPKLFETVKCEVQSAISKETRMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKTANPNKNSARGFEVIDKIKSAVEKVCPGAVSCADILTITARDSVEILGGPTWDVKLGRRDARTASKSAANNDIPAPTSSLNQLISRFNALGLSTKDLVALSGGHTIGQARCTTFRAHIYNDSNIDTSFARTRQSGCPKTSGSGDNNLAPLDLATPTSFDNHYFKNLVDSKGLLHSDQQLFNGGSTDSIVHEYSLYPSSFSSDFVTAMIKMGDISPLTGSNGEIRKQCRSVN* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2883 325 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr5g2883 325 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr5g2883 325 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr5g2883 325 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr5g2883 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr5g2883 325 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Mtr5g2883 325 Gene3D - 34 325 - -
Mtr5g2883 325 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2883 325 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2883 325 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2883 325 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2883 325 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2883 325 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2883 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2883 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2883 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2883 325 PANTHER PEROXIDASE 11 325 - -
Mtr5g2883 325 PANTHER PEROXIDASE 72-RELATED 11 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2883 325 ProSiteProfiles Plant heme peroxidase family profile. 30 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr5g2883 325 SUPERFAMILY Heme-dependent peroxidases 30 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr5g2883 325 CDD secretory_peroxidase 30 324 IPR033905 GO:0004601|GO:0042744
Mtr5g2883 325 Pfam Peroxidase 48 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr5g2883 325 Gene3D Peroxidase, domain 2 168 304 - -
Mtr5g2883 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2883 Mtr-Chr5 37387885 37390124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2883 29 325 Peroxidase AT5G05340 72.727 6.03e-164 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2883 K00430 - gmx:100803637 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3274 3 46641557 46643475 Mtr5g2883 5 37387885 37390124 ECH
Mtr3g1805 3 30512874 30515513 Mtr5g2883 5 37387885 37390124 ECH
Mtr5g2883 5 37387885 37390124 Mtr5g2883 5 37387885 37390124 ECH