Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2877 ATGACCGGAGCAAATACACCTCTCTTATCAAGTTCCAAGGTTTCTACCGAGCCGGCAACTGTCTCCGGTGCGGTGTTTAATGTCGCCACGAGCATAATTGGCGCTGGAATTATGTCACTTCCAGCAACTCTAAAGGTTCTTGGTGTGATTCCAGGGTTTGTTTTGATTCTGGTGATTGCTTTATTGGCTGAAATATCGGTGGAGTTTTTGATGAGGTTTACAAATTCCGGTGAAACGACGACGTATTCTGGTGTTATGAGAGAAGCTTTTGGACCCTTAGGAGCTGTGGCAACTCAACTTAGCGTTGTGATTACTAATCTTGGGTGTTTAATTATGTACTTGATTATTATTGCGGATGTACTTTCTGGAAATCAACCTGAAGGAGAAGTACATTTGGGTATTTTGCAACAATGGTTTGGAATTCATTGGTGGAATTCACGTGAATTTGCTTTGCTCATTACCTTAATCTTCATTTTGCTTCCATTGGTATTGTACCGTCGTGTAGAGTCATTGAAATTTAGTTCTGCAGTATCAACTCTTCTAGCTGTGGCATTTGTTACAACATGTTCTGTCTTGGCAATTGTTGCACTTGTGGAAGGAAAAACACAATCACCAAGATTGGTTCCTCGTTTGGACCATCAAACATCTTTCTTTGATCTTTTCACTGCAGTTCCTGTCATAGTCACTGCCTACACATTTCATTTTAATGTACATCCAATTGGGTTTGAACTTGGAAAACCATCAGATATGAAAAAAGCAGTGAGAATAGCATTAATCCTATGTGCACTCATATACTTTTCAATAGGCCTATTTGGTTACCTATTATTTGGTGATGCAACTCAATCAGACATTCTAATAAATTTTGACCACAATGCTGATTCTTCATTTGGTTCATTGCTCAATACTTTGGTCCGTTTAAGCTATGCTTTTCATGTTATGCTAGCATTTCCTCTTCTCAATTTCTCTTTGAGAACCAATATTGATGAATTCTTCTTCCCTAAAAAACCTTTGTTAGCCACAGATAACAAGAGATTTGTGTTCCTCACTTTGGTGCTGTTGGTTTTTAGTTACATTGCTGCTGTTGCAATTCCAGATATTTGGTTCATTTTTCAGTTTATGGGATCAACTTCTGCAGTTTGTCTTGCATTTGTGTTTCCTGGTTCTATTGTTCTAAGGGATATTCATGGTATATCAACAAGAAAAGACAAGATTATAGCACTGGCTATGGTTATACTAGCTCTAGTAACAAGTGTGATTGCTATCTCCAACAACATATATAAGCTGTTTTAG 1290 0.3798 MTGANTPLLSSSKVSTEPATVSGAVFNVATSIIGAGIMSLPATLKVLGVIPGFVLILVIALLAEISVEFLMRFTNSGETTTYSGVMREAFGPLGAVATQLSVVITNLGCLIMYLIIIADVLSGNQPEGEVHLGILQQWFGIHWWNSREFALLITLIFILLPLVLYRRVESLKFSSAVSTLLAVAFVTTCSVLAIVALVEGKTQSPRLVPRLDHQTSFFDLFTAVPVIVTAYTFHFNVHPIGFELGKPSDMKKAVRIALILCALIYFSIGLFGYLLFGDATQSDILINFDHNADSSFGSLLNTLVRLSYAFHVMLAFPLLNFSLRTNIDEFFFPKKPLLATDNKRFVFLTLVLLVFSYIAAVAIPDIWFIFQFMGSTSAVCLAFVFPGSIVLRDIHGISTRKDKIIALAMVILALVTSVIAISNNIYKLF* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2877 429 Pfam Transmembrane amino acid transporter protein 19 419 IPR013057 -
Mtr5g2877 429 PANTHER AMINO ACID TRANSPORTER 4 428 - -
Mtr5g2877 429 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 4 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2877 Mtr-Chr5 37336147 37338952 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2877 7 428 Amino Acid or Auxin Permease AAAP Family AT3G56200 60.190 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2877 - - cam:101493057 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2877 5 37336147 37338952 Mtr5g2877 5 37336147 37338952 ECH
Mtr5g2877 5 37336147 37338952 Mtr3g2224 3 35888121 35890737 PCT