Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2876 ATGTCTAATTCCACTACAGAATCTATCACCCCTCTTCTACCACAAAACAACAACCACCTTCAAGAAAACCCAATCCCAGACCCAATTCCACAAAATGGAACAGTTTCTGGAGCAGTATTCAACATATCAACAACCATGGTGGGTGCTGGAATCATGTCCATTCCGGCAACGATAAAAGTTCTTGGTATAATTCCGGGGCTATTGGTGATCGTGTTGGTGGCAGTTATAACTGATTTAACTGTTGAGTTTATGTTGAGGTGTACAAGTTCTGGTAAAGCTGTTACGTATGCTGGTATGGTGGGAGAGAGTTTTGGTTCTGTTGGATCTCTTGCTGTTAAGATTTGTGTTATTACCACTAATCTTGGTGTTCTTATCGTCTATTTCATTATTCTTGGAGATGTGCTATGTGGAAATGAGTTCAATGGTGACACACATTTAGGTATTCTACAGCAATGGTTTGGTATCCACTGGTGGACATGTCGTGCTTTTGCTCTTCTTACAGTTGCACTTTTCATAATGCTTCCCCTAGTTATGTTACGCCGTGTAGATTCACTCAAGTATAGTTCTGCTTTATCAATCCTACTAGCATTGGTTTTTGTTGTAATATGCTCCTCAATGGCATTACATGCATTATGGTCCGGGAAAACTCAGTCTGTGAGAATACTACCCGATTTCTCTCAAGTCACTGCCCTCGATCTTTTCACCACTGTCCCCATTTTTGTCACAGGGTTTGGATTTCATGTCAATGTTCATCCCATTAGAGCAGAGCTTGTAAAACCAACAGACATGAGTATTGCCGTTCGACTTTCATTGTTAATATGCGTAGCCATTTACTTTGCTATCGGGTTCTTTGGATACCTATTGTTCGGGGAGTCGATCATGCCAGATGTATTGATAAACTTCGACCAAAACTCCGATTCAAGCATCGGTCGATTGCTTGACGATGTTGTTCGGCTAAGCTACGCGCTCCATCTTGCACTTGTGTTCCCTATCATGAACTATTCCTTGAGGGCCAACATAGACGAACTATTATTCTCAAAGAAAAATAAGCCTCCTTTGGCCTTGGATACCCCTAGATTTGTGTCACTCACTCTTGTTTTGCTAGCATTCACATATTTGTTAGCTGTGGCCATTCCAAATGTTTGGTACTTTTTTCAGTTTTTGGGATCCACTACCATTCCTTGCCTCTCATTCCTCTTCCCTGCTGCAATCATTCTAAGGGATAGGCATGACATATCAAAAACAAAAGATCAAGTAATAGCAATAGTGGTGATCATTTTGGCTGTTGGGACAAGTGGAATTGCTATATGGACCAATTTGTATGGTTCTTCTAGTGCTTGA 1341 0.4109 MSNSTTESITPLLPQNNNHLQENPIPDPIPQNGTVSGAVFNISTTMVGAGIMSIPATIKVLGIIPGLLVIVLVAVITDLTVEFMLRCTSSGKAVTYAGMVGESFGSVGSLAVKICVITTNLGVLIVYFIILGDVLCGNEFNGDTHLGILQQWFGIHWWTCRAFALLTVALFIMLPLVMLRRVDSLKYSSALSILLALVFVVICSSMALHALWSGKTQSVRILPDFSQVTALDLFTTVPIFVTGFGFHVNVHPIRAELVKPTDMSIAVRLSLLICVAIYFAIGFFGYLLFGESIMPDVLINFDQNSDSSIGRLLDDVVRLSYALHLALVFPIMNYSLRANIDELLFSKKNKPPLALDTPRFVSLTLVLLAFTYLLAVAIPNVWYFFQFLGSTTIPCLSFLFPAAIILRDRHDISKTKDQVIAIVVIILAVGTSGIAIWTNLYGSSSA* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2876 446 MobiDBLite consensus disorder prediction 1 27 - -
Mtr5g2876 446 Pfam Transmembrane amino acid transporter protein 32 420 IPR013057 -
Mtr5g2876 446 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 7 444 - -
Mtr5g2876 446 PANTHER AMINO ACID TRANSPORTER 7 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2876 Mtr-Chr5 37329449 37333393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2876 12 441 Amino Acid or Auxin Permease AAAP Family AT3G56200 51.389 1.43e-152 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2876 - - gmx:100794031 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2224 3 35888121 35890737 Mtr5g2876 5 37329449 37333393 PCT