Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2869 ATGGCTAGCACTGATGCTGATATGTCGATGTATCGCAGCCTTGTTGAGGTTGATCACGATGGTAACCCGTCATGGTTATCTGCAGGCGATCGTACACTAGTTTCTCAAATTAAAAATGGTATAGCCCAACCTAATGCAATAGTGGCCATGGATGGCAGTGGTCAATATAAAACGATTACTGATGGCATTAACTCGTATCCTAATAATCACCAAGGAAGATACATTATCCATGTCAAGGCTGGCATCTACAAGGAGTATGTAACTGTTGATCAAAGCAAAAAAAATATTCTCTTGTATGGTGATGGTCCCAACCGTACCATTATCACTGGAAACAAGAGCTTCACCGAAGGAATCCAAATGCCACTAACTGCAACATTCTCCACCTTTGCTGAAAATTTCACTGCCATATCAATTGTATTTGAGAATACAGCGGGTCCAAAAGGTGGTCAAGCAGTAGCACTTCGTGTTAAAGGTGACCTCTCATCATTCTACCAATGTACATTCCGTGGTTATCAAGACACGTTGTACGTAGACCAGGGTCGTCAGTTTTACCGCAATTGTGTGATTTCTGGAACCATCGACTTCATATGTGGTCACTCGACTACCTTAATCCAGAATTCTATGATTTTGGTGAGAAAGCCCGCTTCAGGCCAATACAATGTTGTGGTGGCAGATGGCCCATACCAAAACAACAATTTACGTACTGGTATAGTCATTGATCATTGCTCCATCCTTCCAGATTATGATTTCGCACCTTATACTTCAACGTCGAAGACTTATTTGGCAAGACCATGGAGGCCATATTCAACGGCAATCTTTATTAACAATTTTATCGGCAATTTTATTCAACCTGATGGGTATACGATTTGGAGAGAAGTTCAACCAAACAATGAAAATGTTTATTTTGCTGAGTTTGGCAACACTGGACCTGGTGCCAATGCTAAAAATAGGGTCTATTGGGCAAAAGGTCTTATTACAAGAGATGAGGCTGCTAGATTCACCGCTGAACCGTGGATTCAAGCTAGTACTTGGTTACCTTCCGCTGGCATTCCTTACAATCCTGGCTTTGAGACACTATCTTAA 1083 0.4164 MASTDADMSMYRSLVEVDHDGNPSWLSAGDRTLVSQIKNGIAQPNAIVAMDGSGQYKTITDGINSYPNNHQGRYIIHVKAGIYKEYVTVDQSKKNILLYGDGPNRTIITGNKSFTEGIQMPLTATFSTFAENFTAISIVFENTAGPKGGQAVALRVKGDLSSFYQCTFRGYQDTLYVDQGRQFYRNCVISGTIDFICGHSTTLIQNSMILVRKPASGQYNVVVADGPYQNNNLRTGIVIDHCSILPDYDFAPYTSTSKTYLARPWRPYSTAIFINNFIGNFIQPDGYTIWREVQPNNENVYFAEFGNTGPGANAKNRVYWAKGLITRDEAARFTAEPWIQASTWLPSAGIPYNPGFETLS* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2869 360 PANTHER PECTINESTERASE 16 356 - -
Mtr5g2869 360 Pfam Pectinesterase 45 341 IPR000070 GO:0030599|GO:0042545
Mtr5g2869 360 SUPERFAMILY Pectin lyase-like 42 354 IPR011050 -
Mtr5g2869 360 PANTHER PECTINESTERASE 16 356 - -
Mtr5g2869 360 Gene3D - 40 356 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2869 Mtr-Chr5 37277058 37278596 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2869 5 356 Carbohydrate Esterase AT2G47030 42.149 9.80e-102 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2869 K01051 - gmx:100808559 435.261