Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2862 ATGGACACTTCTACTAGAAAGAAGAAAAACAACACTCATCAAGTTTTGCAACTTGGGATGAGAAATGCAGAAGAAAGTTCCAATTTTTACAACAACCCACTTCATTTTTTCAGGTCATTTTTCATTTGCATCTTCTGGGTCAATTTTTTGTGGCTTCTTTTACTTCCTGTGAAGCCAGTTTTGTGTGAAGAGCAATGGGATGGAGTTGTTGTAACACAATCAAATTTCTTAGCACTTCAAGCATTCAAAGAAGAGTTAATTGATCCAAAAGGTTTCTTAAGAAGCTGGAATGATAGTGGCTTTGGAGCTTGTTCTGGAGGTTGGGTTGGAATCAAATGTGCTCAAGGAAAAGTGATTATAATTCAGCTTCCATGGAAAGGATTGAAGGGGAGAATCACTGAGAGGATTGGTCAACTTGAAGGTCTTAGAAAGCTTAGTCTTCATAATAACCAAATTGGTGGTTCAATCCCTTCAACATTAGGACTTCTCAACAATCTAAGAGGTGTTCAACTCTTCAATAATAGGTTAACAGGTTCAATTCCTGCTTCATTAGGTTTTTGTCCTATGCTTCAATCTTTAGACTTTAGTAACAATTTGCTCATAGGTACAATCCCTGAGAGTCTTGGAAATGCTACTAAGCTTTATTGGCTTAACTTGAGTTTCAATTCTATTTCTGGTTCTATACCAACTAGCCTAACTAGTTTGAATTCTCTCACTTTCATATCTCTTCAACATAATAATCTCTCAGGTTCTATTCCTAACTCATGGGGTGGTAGCTTGAAAAATGGATTCTTTAGGCTTCAAAATCTTATCTTGGATCATAACTTTTTCACCGGTAGTATTCCTGATTCTTTAGGTAACTTAAGGGAACTTAGAGAGATTTCTCTAAGTCATAACCAATTTAGTGGTCACATTCCTCAAAGTATTGGGAACCTTTCAATGCTTAGACAGCTTGATTTGTCACTGAATAATCTTAGTGGAGAAATTCCAGTTTCCTTTGACAATCTGCCTAGTCTTAATTTCTTCAATGTTTCTCATAATAATTTATCCGGTCCTGTTCCAACATTACTAGCAAAGAAATTTAACTCAAGCTCATTTGTGGGAAATATTCAACTATGTGGTTATAGTCCTTCAACTCCGTGTTCCTCTCCAGCTCCTTCGGAAGGACAAGGTGCACCTTCTGAAGAATTGAAACACCGGCATCACAAGAAACTAGGTACAAAGGACATAATCCTCATAGTCGCAGGAGTGCTCCTTGTAGTCCTGCTAATAGTCTGCTGCATCCTGCTCTTGTGTCTTATCCGGAAAAGGAAAACATCAGAGGCCGAGGGTGGCCAGGCCACAGGGAGATCAGCTGCTGCTGCTACAAGGGCAGGAAAAGGAGTCCCTCCGATCGCTGGAGATGTTGAAGCGGGTGGTGAAGCTGGAGGCAAACTGGTTCATTTTGATGGACCACTTGCTTTTACCGCTGATGATCTCTTGTGTGCAACTGCCGAGATAATGGGAAAGAGCACCTATGGAACAGTGTATAAGGCAACATTAGAGGATGGTAGTCAAGCTGCGGTGAAACGATTGAGGGAAAAGATAACTAAAAGTCAGAGAGACTTTGAATCTGAAGTTAGTGTTCTAGGGAGAATTAGACACCCAAATCTTTTGGCACTTAGAGCCTATTACTTGGGACCTAAAGGAGAAAAGCTTCTGGTTTTTGATTACATGCCTAAGGGGAGTCTTGCTTCTTTCCTACATGCTGATGGACCTGAAATGAGAATTGATTGGCCAACAAGGATGAACATAGCGCAAGGCATGGCACGTGGTTTGCTTTACCTACATTCACATGAGAACATTATACATGGGAATCTTACTTCAAGCAATGTGTTGCTTGATGAGAACACAAATGCTAAAATAGCAGATTTTGGTCTATCTAGGTTAATGACAACTGCGGCTAACTCTAATGTGATTGCTACTGCCGGAGCATTGGGATACCGAGCACCGGAGCTATCTAAGCTTAAGAAAGCAAACACAAAATCTGATGTATACAGTCTTGGTGTAATCTTGTTAGAACTCCTAACAAGGAAGCCACCTGGTGAGGCAATGAATGGTGTGGATTTACCTCAATGGGTTGCTTCTATTGTTAAAGAGGAGTGGACAAATGAGGTCTTTGATGTTGATTTGATGAGAGATTCTTCAGCAAATGGTGATGAGTTGCTGAATACTTTGAAGCTTGCTTTGCATTGTGTTGATCCTTCTCCATCAGCACGACCAGAAGTTCAACTTATACTTCAGCAACTTGAAGAGATTAGACCACAAATATCATCAGCCGTTTCTAGTGATGAAGGAGCCATCCCTTCCACGAGTGAATAA 2361 0.4028 MDTSTRKKKNNTHQVLQLGMRNAEESSNFYNNPLHFFRSFFICIFWVNFLWLLLLPVKPVLCEEQWDGVVVTQSNFLALQAFKEELIDPKGFLRSWNDSGFGACSGGWVGIKCAQGKVIIIQLPWKGLKGRITERIGQLEGLRKLSLHNNQIGGSIPSTLGLLNNLRGVQLFNNRLTGSIPASLGFCPMLQSLDFSNNLLIGTIPESLGNATKLYWLNLSFNSISGSIPTSLTSLNSLTFISLQHNNLSGSIPNSWGGSLKNGFFRLQNLILDHNFFTGSIPDSLGNLRELREISLSHNQFSGHIPQSIGNLSMLRQLDLSLNNLSGEIPVSFDNLPSLNFFNVSHNNLSGPVPTLLAKKFNSSSFVGNIQLCGYSPSTPCSSPAPSEGQGAPSEELKHRHHKKLGTKDIILIVAGVLLVVLLIVCCILLLCLIRKRKTSEAEGGQATGRSAAAATRAGKGVPPIAGDVEAGGEAGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKSQRDFESEVSVLGRIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHADGPEMRIDWPTRMNIAQGMARGLLYLHSHENIIHGNLTSSNVLLDENTNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKSDVYSLGVILLELLTRKPPGEAMNGVDLPQWVASIVKEEWTNEVFDVDLMRDSSANGDELLNTLKLALHCVDPSPSARPEVQLILQQLEEIRPQISSAVSSDEGAIPSTSE* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2862 786 ProSiteProfiles Protein kinase domain profile. 495 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2862 786 CDD STKc_IRAK 501 766 - -
Mtr5g2862 786 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 47 332 - -
Mtr5g2862 786 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 301 778 - -
Mtr5g2862 786 Pfam Protein tyrosine and serine/threonine kinase 498 763 IPR001245 GO:0004672|GO:0006468
Mtr5g2862 786 Gene3D Phosphorylase Kinase; domain 1 501 572 - -
Mtr5g2862 786 Pfam Leucine rich repeat N-terminal domain 77 113 IPR013210 -
Mtr5g2862 786 MobiDBLite consensus disorder prediction 381 400 - -
Mtr5g2862 786 Gene3D Ribonuclease Inhibitor 188 259 IPR032675 -
Mtr5g2862 786 Gene3D Ribonuclease Inhibitor 260 383 IPR032675 -
Mtr5g2862 786 Gene3D Transferase(Phosphotransferase) domain 1 573 780 - -
Mtr5g2862 786 SMART LRR_typ_2 336 359 IPR003591 -
Mtr5g2862 786 SMART LRR_typ_2 312 335 IPR003591 -
Mtr5g2862 786 SMART LRR_typ_2 288 311 IPR003591 -
Mtr5g2862 786 SMART LRR_typ_2 139 163 IPR003591 -
Mtr5g2862 786 SMART LRR_typ_2 235 258 IPR003591 -
Mtr5g2862 786 SMART LRR_typ_2 187 211 IPR003591 -
Mtr5g2862 786 SUPERFAMILY Protein kinase-like (PK-like) 499 768 IPR011009 -
Mtr5g2862 786 Gene3D Ribonuclease Inhibitor 74 187 IPR032675 -
Mtr5g2862 786 SUPERFAMILY L domain-like 74 373 - -
Mtr5g2862 786 Pfam Leucine rich repeat 266 325 IPR001611 GO:0005515
Mtr5g2862 786 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 301 778 - -
Mtr5g2862 786 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 47 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2862 Mtr-Chr5 37221993 37224959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2862 66 768 Receptor kinase-like Gene Family AT3G51740 58.140 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr5g2862 PK_Tyr_Ser-Thr 5.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2862 - - twl:120012031 997.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2862 5 37221993 37224959 Mtr5g2862 5 37221993 37224959 ECH