Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2837 ATGAGGAATTGTATGATGTTTCTTTTCTACTTTGCTGCTAGCCAAATGTTGGTGTATTATTTCATACCTTCAACAACTGCTTCTCTTTCTTTGAGTTCGCAGACTGATAAGCTTGCTTTGCTTGCTTTAAAGGAAAAGCTTACAAATGGTGTACCAGATTCTTTGCCATCATGGAATGAGTCTCTACATTTCTGTGTGTGGCAAGGGATTACATGTGGTCGTCGTCACATGAGAGTCTCTTCCTTGCATTTGGAAAATCAAACATTGGGTGGCACTCTTGGACCATCTTTGGGTAATTTAACATTTCTCAGATTACTCCGACTTAGAAATGTTAACTTGCATGGTGAAGTTCCAAAACAAGTTGGTTGTTTGAAGCGGTTGCAAGTTGTTGACTTAAGCAACAACAATCTTAAAGGAGAAGTTCCTACCGAGCTCAAAAACTGCACAAAACTCCAAAGTATTAACTTGTTGCACAATCAACTCAATGGAAATGTTCCCACATGGTTGGAATCAATGATGCATCTTACCGAGTTACTTCTTGGAATCAATAATTTAGTTGGTACTGTTCCTTCTTCTTTGGGAAATATTTCATCACTCCAACGATTAATACTTGGAAGGAATCAATTGGAAGGAACCATACCTTATACTTTGGGTAGGTTGCAAAATTTGATAGATTTGACTCTGAGTTCAAATCATTTGTCAGGTGAAATTCCTCATTCTCTTTACAATCTATCCAATATTCAATATCTTGTTCTCGCAGGAAACCAATTGTTTGGTCGTCTTCCATCAAATATGAATCTTGTTTTTCCCAGTCTTAAAGAATTCTTGGTAGGAGGGAACAATTTAAGCGGAACTTTTCCGTCTTCAATATCAAACCTCACTGAATTGGATGCGTTTGATATATCATATAATAATTTTAATGGGAACATACCTCTTACTTTAGGTCGATTAAATAAACTTCAAAGATTTCACATTGGTGATAATAATTTTGGGAGTGGGAAAACTAATGATTTGTATTTCATGTCGTCGTTAACAAATTGTACTCAATTACAAAAGCTAATTATGGATTTCAACAGATTTGGGGGTTTGCTTCCAAATTTTATAGGAAATTTTTCCACCAATCTCACATTGCTTAGTATGATATATAATCAAATATATGGGGAGATACCTGGAACAATTGGACAACTAACTGGTTTATCTTTCTTAGATATTGGGTACAATTTCCTTGAGGGACCAATTCCAAATTCAATTGGAAAGCTTAAAAATCTAGTAAGATTGGTATTGCAAAATAACAAATTTTCCAGTTATATACCTACTAGTATTGGAAATCTTACTATCTTGTCTGAACTATATCTAGTAGAAAATAATTTGGAAGGAAGCATTCCGGTTACCATCAAATATTGCAGGCAGTTGCAAATATTAACTATTTCTGATAACAAATTGAGTGGTGATGTTCCAAATCAAACATTTGGCTATCTAGAAGGCTTAATAAATCTTGACTTGTCCAACAACTTCTTGACTGGTTTCCTTCCTTCGGAGTTTGGCAACATGAAGCATCTTTCCATATTGAATCTATACTCAAACAGGTTTTCTGGTGAAATTCCAAAGGAGCTTGTTTCTTGCTTGACCTTAACAGAGCTTTTGTTGGAGGAAAACTTTTTCCATGGAGATATACCTTCGTTCTTGGGCTCTTTAAGAAACCTGAATCTCTTAGACCTTTCTAACAACAACTTATCTGGGACAATCCCTCATGAGCTAGAAAACCTGAAACTGTTGAATACTTTGAACCTGTCTTTTAACGATCTCTACGGCGAGGTTCCCAAAGAAGGTGTATTCAGCAATGTTACAGCAATTTCACTAATTGGAAATAAGAACTTATGTGGGGGAATACCTCAATTGAAGCTTCCTCCATGTTTTAAGGTACCCACCAAAAAACACAAAAGATCTCTAAAAAAGAAACTTGTCCTCATCATTGTACTTGGTGGGGTTTTGATCTCTTTCATAGCTTCTATAACTGTTCATTTTCTCATGAGAAAGTCCAAAAAGTTGCCTTCTTCACCATCTTTGCGAAATGAGAAGTTGAGGGTTACTTATGGAGAGCTATATGAAGCAACTGATGGATTTTCTTCAGCCAATTTGGTTGGAACAGGAAGCTTTGGATCTGTTTATAAAGGATCTCTTCTCAACTTTGAAAGACCTATTGTTGTAAAGGTGTTGAATCTTGAAACACGTGGAGCAACAAAAAGTTTCATAGCGGAATGCAATGCATTGGGAAAGATGAAGCACCGGAATCTTGTCAAGATTTTAACTTGTTGTTCAAGTGTTGATTATAATGGTGAAGATTTCAAAGCTATTGTTTTTGAGTTCATGTCAAATGGGAGTCTTGAAAAGTTGTTGCACGATAATGAAGGGTCAGGAAATTTTAATCTCAACCTCACACAAAGGTTAGACATTGCTCTTGATGTAGCTCATGCATTGGATTATCTTCACAATGATACAGAACAAGTCGTAGTTCACTGTGATATTAAGCCAAGCAATGTTCTTCTTGATGATGAAATTGTAGCCCACTTGGGAGACTTTGGCCTAGCTAGGCTCATTCATGGAGCTACAGAACATTCAAGTAAAGATCAAGTTAATTCCTCTACAATTAAGGGAACTATAGGATATGTTCCTCCTGAGTATGGAGCAGGTGGTCCGGTATCACCGGAGGGAGATATTTACAGCTATGGGATTCTGCTGTTGGAAATGCTTACCGGAAAGAGACCAACAGATAACATGTTTTATGAGAATCTAACTCTACACAAATTCTGTAAGATGAGAATTCCTGAAGAAATTCTTGAGGTTGTAGATTCCCGTTGCCTTATTCCATTGGTTGAAGATCAGACACGAGTTGTGGAAAACAACATAAAGGAGTGTCTAGTGATGTTTGCTAAAATAGGAGTTGCATGTTCTGAAGAATTTCCTACTCAGAGAATGCTCACAAAAGATGTTATAATTAAGTTGCTTGAAATTAAACAGAAGTTACTTTCCTAA 3033 0.3637 MRNCMMFLFYFAASQMLVYYFIPSTTASLSLSSQTDKLALLALKEKLTNGVPDSLPSWNESLHFCVWQGITCGRRHMRVSSLHLENQTLGGTLGPSLGNLTFLRLLRLRNVNLHGEVPKQVGCLKRLQVVDLSNNNLKGEVPTELKNCTKLQSINLLHNQLNGNVPTWLESMMHLTELLLGINNLVGTVPSSLGNISSLQRLILGRNQLEGTIPYTLGRLQNLIDLTLSSNHLSGEIPHSLYNLSNIQYLVLAGNQLFGRLPSNMNLVFPSLKEFLVGGNNLSGTFPSSISNLTELDAFDISYNNFNGNIPLTLGRLNKLQRFHIGDNNFGSGKTNDLYFMSSLTNCTQLQKLIMDFNRFGGLLPNFIGNFSTNLTLLSMIYNQIYGEIPGTIGQLTGLSFLDIGYNFLEGPIPNSIGKLKNLVRLVLQNNKFSSYIPTSIGNLTILSELYLVENNLEGSIPVTIKYCRQLQILTISDNKLSGDVPNQTFGYLEGLINLDLSNNFLTGFLPSEFGNMKHLSILNLYSNRFSGEIPKELVSCLTLTELLLEENFFHGDIPSFLGSLRNLNLLDLSNNNLSGTIPHELENLKLLNTLNLSFNDLYGEVPKEGVFSNVTAISLIGNKNLCGGIPQLKLPPCFKVPTKKHKRSLKKKLVLIIVLGGVLISFIASITVHFLMRKSKKLPSSPSLRNEKLRVTYGELYEATDGFSSANLVGTGSFGSVYKGSLLNFERPIVVKVLNLETRGATKSFIAECNALGKMKHRNLVKILTCCSSVDYNGEDFKAIVFEFMSNGSLEKLLHDNEGSGNFNLNLTQRLDIALDVAHALDYLHNDTEQVVVHCDIKPSNVLLDDEIVAHLGDFGLARLIHGATEHSSKDQVNSSTIKGTIGYVPPEYGAGGPVSPEGDIYSYGILLLEMLTGKRPTDNMFYENLTLHKFCKMRIPEEILEVVDSRCLIPLVEDQTRVVENNIKECLVMFAKIGVACSEEFPTQRMLTKDVIIKLLEIKQKLLS* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2837 1010 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 19 1008 - -
Mtr5g2837 1010 PANTHER LRR RECEPTOR-LIKE KINASE 19 1008 - -
Mtr5g2837 1010 PRINTS Leucine-rich repeat signature 496 509 - -
Mtr5g2837 1010 PRINTS Leucine-rich repeat signature 565 578 - -
Mtr5g2837 1010 Gene3D Ribonuclease Inhibitor 199 335 IPR032675 -
Mtr5g2837 1010 Gene3D Ribonuclease Inhibitor 336 647 IPR032675 -
Mtr5g2837 1010 ProSitePatterns Protein kinases ATP-binding region signature. 714 737 IPR017441 GO:0005524
Mtr5g2837 1010 SUPERFAMILY L domain-like 372 628 - -
Mtr5g2837 1010 SMART serkin_6 708 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2837 1010 Gene3D Ribonuclease Inhibitor 33 192 IPR032675 -
Mtr5g2837 1010 Gene3D Phosphorylase Kinase; domain 1 670 789 - -
Mtr5g2837 1010 SMART LRR_typ_2 420 444 IPR003591 -
Mtr5g2837 1010 SMART LRR_typ_2 493 516 IPR003591 -
Mtr5g2837 1010 SMART LRR_typ_2 565 588 IPR003591 -
Mtr5g2837 1010 SMART LRR_typ_2 589 614 IPR003591 -
Mtr5g2837 1010 SMART LRR_typ_2 124 148 IPR003591 -
Mtr5g2837 1010 SMART LRR_typ_2 220 244 IPR003591 -
Mtr5g2837 1010 SMART LRR_typ_2 517 541 IPR003591 -
Mtr5g2837 1010 ProSiteProfiles Protein kinase domain profile. 708 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2837 1010 Pfam Leucine rich repeat 543 602 IPR001611 GO:0005515
Mtr5g2837 1010 Pfam Leucine rich repeat 198 257 IPR001611 GO:0005515
Mtr5g2837 1010 Pfam Leucine rich repeat 469 530 IPR001611 GO:0005515
Mtr5g2837 1010 ProSiteProfiles Leucine-rich repeat profile. 567 590 IPR001611 GO:0005515
Mtr5g2837 1010 SUPERFAMILY Protein kinase-like (PK-like) 681 999 IPR011009 -
Mtr5g2837 1010 SUPERFAMILY L domain-like 33 330 - -
Mtr5g2837 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 837 849 IPR008271 GO:0004672|GO:0006468
Mtr5g2837 1010 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Mtr5g2837 1010 Pfam Protein kinase domain 711 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2837 1010 Gene3D Transferase(Phosphotransferase) domain 1 790 1009 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2837 Mtr-Chr5 36950866 36954323 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2837 31 1009 Receptor kinase-like Gene Family AT3G47570 43.404 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr5g2837 Pkinase 2.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2837 - - gmx:100776429 1236.48