Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2824 ATGGCTGTTTCAAACAGTGTCGAAGCTGTGTTCGAATTTCTAAGAAAAAATGGATTATCAGAAGCAGAATCAGCTCTAAGACAAGACATCATTGATAAGCACAACAATGATCTTGCTTCCTTTGACTACGAGAAATTCTTTTTTCCAATGGTTCCTCCACCTCCTCCGGTCAAACTCCGCTCATTTTCACGCCCGTCGGAGTTTACCTCTGGCGACGGTCAATTCTCCAAATCAAACTCTGTTTCTTCTGAAGAACAGTTTGTTAGCATCGCTTCTTCTACTTCTCCTTCTCGTTCTCGTGTTTCTTCTTCAGAATTTATCAATCCATATGGAATTAATTCCTCATCTCAGACTCAGAATGATTCTGAATCCTCATCTGATAGATTGTCCCAATTCGGCACAGCACGCGATTATCACGAATTCGATATGCAACATGAACCGTATTGGTATAACGAAAACGATGACGATGATGATTTCATGACTCCTGATTTTGATGGACCAGATTTCTTTGGATGTCAAAGTGAAGATAAGTTTATCTTGAATTCAGAAACAGAAAATCAACAAGATGATTCTCGTGATCTTCATTACAACTTTGAAGAAATTCAGTTAGAGGGAAATGAAGGTTACATAGACAAGTCAATGGAGCAATGCCTTTGTAATCATTCATCTGGAGGTGATGAAAATGCGACTTATTCAAAAGATTATTGTCACGGGGCCGAGAAAGAAGCCATTGCGCATAATTGTGAAGTTCCCTTTTGCAAAAGCAGTCCAGGTTCAGGAGGTTCTTGTAGCGAGGATCCTATGAACTTTAGCTACCTTAATTTGAAGGAAATTAAGCTGAATCTGAATGATTTTCATATGAAGGATATTAATTCTTTTGATTCTGTTCCTGTGCTTACCATGAAGCATAGTTCAGATTGCTACAAGGATCCCTATGACTTAACCATCGAAGTTGTTGAAACAGATCTACCGAATGGGATCGAAAGCTATGAAGTAAGAGATGACCGAGATTTGAATGAAGAACTCCATGTTCCGGAGGTTGCCGCAGATGGAGAGGATAATAATACTGATGATGACCTCTTAAAATACATTCAAGATGATGAATATGAAGTATTTGAGCTAAGAATTGTACATAGAAAAAACAGGACTGGATTTGAAGAAAACAAGGAAGTTCCAATTGTGCTCAACTCAGTCATGGCTGGAAGGTACTATGTGACAGAATATCTCGGTTCAGCTGCATTCAGTAGGGTTGTTCAAGCCCATGATCTTCAGATGGGAATTGATGTTTGTTTGAAGATTATTAAAAATGACAAGGATTTCTTTGATCAAAGCCTAGATGAAATCAAGCTTCTTAAACTCGTCAATAAGCACGACCCAGGAGATAAACACCACATACTGCGTCTTTATGACTATTTCTACCATCAGGAACATTTATTCATTGTGACCGAACTTCTGCGTGCAAACTTATATGAATTTCAGAAATTCAACCAAGAATCTGGTGGTGAAGCATATTTTACATTAAAGAGATTGCAGCTCATTACTCGACAGTGTTTGGAGGCATTGCAATATTTACATAACTTGGGAATTGTTCACTGCGACCTGAAGCCTGAAAACGTTCTAATCAAAAGTTACAAAAAATGTGAAATAAAGATTATTGATCTTGGAAGCAGTTGCTTTAAAACAGACAATCTGTGTCTATATGTACAATCCCGGTCTTATAGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGATATATGGTCGCTCGGCTGTATTTTGGCTGAGCTATGCTCCGGTGAAGTGCTTTTTCCAAATGATGCAGTCGTGATGATTCTAGCACGCATGATTGGAATGTTTGGTCCTTTTGATATGGAGATGTTGGTGAAAGGGCAGGAAACACACAAGTACTTCACCAAAGAATATGACATTTACTTCATAAATGAGGAGACAGATCAACTAGAGTACATAATTCCAGAAGAGACTTCATTAGAGCACCACCTACAGATCAACGATACTATGTTTATCGACTTCGTCAGTTATCTGCTTAACGTCAACCCCAAAAGAAGGCCTACTGCAAGACAGGCACTAAAACATCCATGGCTTTCCTATGTATACAAGTCCATGTAA 2139 0.3862 MAVSNSVEAVFEFLRKNGLSEAESALRQDIIDKHNNDLASFDYEKFFFPMVPPPPPVKLRSFSRPSEFTSGDGQFSKSNSVSSEEQFVSIASSTSPSRSRVSSSEFINPYGINSSSQTQNDSESSSDRLSQFGTARDYHEFDMQHEPYWYNENDDDDDFMTPDFDGPDFFGCQSEDKFILNSETENQQDDSRDLHYNFEEIQLEGNEGYIDKSMEQCLCNHSSGGDENATYSKDYCHGAEKEAIAHNCEVPFCKSSPGSGGSCSEDPMNFSYLNLKEIKLNLNDFHMKDINSFDSVPVLTMKHSSDCYKDPYDLTIEVVETDLPNGIESYEVRDDRDLNEELHVPEVAADGEDNNTDDDLLKYIQDDEYEVFELRIVHRKNRTGFEENKEVPIVLNSVMAGRYYVTEYLGSAAFSRVVQAHDLQMGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPGDKHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLKRLQLITRQCLEALQYLHNLGIVHCDLKPENVLIKSYKKCEIKIIDLGSSCFKTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMFGPFDMEMLVKGQETHKYFTKEYDIYFINEETDQLEYIIPEETSLEHHLQINDTMFIDFVSYLLNVNPKRRPTARQALKHPWLSYVYKSM* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2824 712 SMART serkin_6 403 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2824 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
Mtr5g2824 712 Gene3D Phosphorylase Kinase; domain 1 397 484 - -
Mtr5g2824 712 MobiDBLite consensus disorder prediction 58 130 - -
Mtr5g2824 712 Gene3D Transferase(Phosphotransferase) domain 1 457 705 - -
Mtr5g2824 712 PANTHER DUAL SPECIFICITY PROTEIN KINASE 8 709 - -
Mtr5g2824 712 SUPERFAMILY Protein kinase-like (PK-like) 393 708 IPR011009 -
Mtr5g2824 712 Pfam Protein kinase domain 405 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2824 712 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 8 709 - -
Mtr5g2824 712 ProSiteProfiles Protein kinase domain profile. 403 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2824 712 CDD PKc_DYRK_like 403 705 - -
Mtr5g2824 712 MobiDBLite consensus disorder prediction 63 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2824 Mtr-Chr5 36789555 36793806 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2824 400 700 MAP Kinase Gene Family AT5G19010 31.153 1.57e-32 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Mtr5g2824 Pkinase 9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2824 - - gmx:100795722 1049.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2824 5 36789555 36793806 Mtr5g2824 5 36789555 36793806 ECH