Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2822 ATGAAGAAAATTTCACTATCTTCCATCATCTTTTCCACTTTCACCTTCGTCATTCTCATCTCATCACTCCCCGTAACCAATGCTCTCGGCTCCGGCACCACCCTCGCCGTGGTTGACTCCACCGCCACCGTCTGCGGCATCATATCATCACAAAAAACTCATAAAATCATTTGCTACCGCCACGGTCACCTCATCACCGCCGTGCCGGAAGTCTCATTCTCTTCAATCTCAGGTGGAAGAAACTACTTCTGTGGTATTAGGTCCGGTAACTACAGTATCCTCTGTTGGGACACTGTTTCATCAAACACAACGTTTGAAACAAGAAGGCTTTACAACAACAACAATGGAACTGTTCTATACGAGAATCTTGCTGTTGGTGATTCACATGTTTGTGCTACAATGGTTAATGTTGGAAACGTTGCTTGTTGGAGAATGAATAAAGGTTTTGTTTTGCCATCTGGGTTTGATCAATTTTCTTCAATAACTTCTGGGTTTGGTTTCACTTGTGGAATTTTGAAGAAAAATGATTCTGGGTCGGTTCGTTGTTTTGGTAATGTGAATGTGAATGAATCTTCCATTGCTGAGAAGATAGAGAAAGAGTTTGTGAATGTTTCTATGGTGAGTCTTGTAGCTGGTGAGTCACATGTTTGTGGATTGAATTCAAAAGGGTTTTTAGTTTGTAAAGGAAGTAATAATTTTGGTCAAATTAATGTTCCTAATCAAGTTGAGCCTTTGGAATATTCTGATTTAGCTTTGGGAGCTGAACATAGTTGTGCTATTAGAAGATCTAATGGTTCTGTTGTTTGTTGGGGTGGTAATGGATTGTTTGATGTTAATGTTACAAAAAATGTTTCTTTTGAGGTTATTGTTTCTGCTTCCAATTTTACTTGTGGATTGACAACAAACAATTTTTCTGTTGTTTGTTGGGGTCCTAGTTGGAATGGTTCAACTTTTCAGCTTCCTTTGCCACCTATTCTACCAGGGATTTGTGTTCAATCTTCTTGTAGTGAATGTGGTATGTATCCTCAATCTCAGTATTTATGTTCTGGATTTAGTAACATTTGTAAACCAAAACCTTGTTGGCCTCAAATGGATGTTCCGGTGCCGTCGCAGATAGCAACCCCGCCGCAGCCGGGGCTGCCGTGTTCTAGGTCAAAGACATTGACAAAGGGGTTATTGTTGTTTGCTATTGTTGGATTAATTGGAGCTGTTGCTGGTTTGTGTACTGTGGTTTATTGTTTGTGGAGTGGTGTGTGTTTTGGTAAGAAGAAAGTTCACAATTCCGTTCAACCAACAATCACTAGAGGTGGAAGTCTTAATTGTGGTGCATTTTCGAATTATAGTCCAACTTCGAGATCATCCACGATTAGGCGACAAGGTTCGAGGATAATGAGGCGTCAGAGAAGCGGAACATCGTCAACAAAACATCCAGATAGGTCAGAAGAATTCACTCTTGCTGAGCTTGTTGCAGCCACAAACAATTTCTCACTTGAGAACAAGGTTGGTGCTGGAAGCTATGGTGTTGTTTACAAAGGTAAACTCGCAGACGGCCGCGAGGTAGCAATCAAAAGGGGTGAAACTAGTACTATGATGAAAGTTTTTCAAGAGAAAGAGAGCGCATTTGAGTCTGAATTAGCCTTTTTGTCGCGCCTACATCACAAGCATTTGGTTAGACTAGTCGGTTTTTGCGACGAGAAAGATGAAAGGCTTTTGGTTTATGAGTTCATGAAGAATGGTGCATTGTATGATCATTTGCACGACAAAAACAACGTTGACAAGAATAGTAGTTTATTGAATTCTTGGAAAATGAGGATCAAAGTCGCATTGGATGCTTCACGTGGAATTGAGTATCTCCATAATTACGCAGTTCCATCAATAATTCATCGAGACATCAAGTCATCGAACATTCTCATTGACGCGGATTGGACAGCTAGAGTGTCTGATTTCGGATTGTCAATGTTGAGTCCGGATTCTGATCATGATTATCGACCAACAAAAGCAGCCGGAACGGTTGGATACATCGATCCTGAATATTATGGTCTAAATGTATTAACAGCAAAGAGTGATGTTTATGGTCTAGGAGTAGTTTTACTTGAGCTATTAACAGGAAAAAGAGCTATATTCAAGAATGATGAAAATGGAGGAACACCAATTAGTATAGTAGATTTTGCAGTGCCTATAATTATGAAAGGAGAATTGATGAAAATTTTGGATCAAAGGGTTGAACCACCAGAGATGAATGAAACAGAAGCAGTGGAGCTTGTGTCATATACTGCAATGCATTGTGTGCATTTGGAAGGAAAAGATAGACCAACAATAAGTGATATTGTGGCTAATTTGGAACGTGCTTTCACTCTTTGTGATAGTAGTAGTCATGGTAGCATTTCTAGTGCTACAATCTCTATTGGATCTGACTGA 2418 0.3995 MKKISLSSIIFSTFTFVILISSLPVTNALGSGTTLAVVDSTATVCGIISSQKTHKIICYRHGHLITAVPEVSFSSISGGRNYFCGIRSGNYSILCWDTVSSNTTFETRRLYNNNNGTVLYENLAVGDSHVCATMVNVGNVACWRMNKGFVLPSGFDQFSSITSGFGFTCGILKKNDSGSVRCFGNVNVNESSIAEKIEKEFVNVSMVSLVAGESHVCGLNSKGFLVCKGSNNFGQINVPNQVEPLEYSDLALGAEHSCAIRRSNGSVVCWGGNGLFDVNVTKNVSFEVIVSASNFTCGLTTNNFSVVCWGPSWNGSTFQLPLPPILPGICVQSSCSECGMYPQSQYLCSGFSNICKPKPCWPQMDVPVPSQIATPPQPGLPCSRSKTLTKGLLLFAIVGLIGAVAGLCTVVYCLWSGVCFGKKKVHNSVQPTITRGGSLNCGAFSNYSPTSRSSTIRRQGSRIMRRQRSGTSSTKHPDRSEEFTLAELVAATNNFSLENKVGAGSYGVVYKGKLADGREVAIKRGETSTMMKVFQEKESAFESELAFLSRLHHKHLVRLVGFCDEKDERLLVYEFMKNGALYDHLHDKNNVDKNSSLLNSWKMRIKVALDASRGIEYLHNYAVPSIIHRDIKSSNILIDADWTARVSDFGLSMLSPDSDHDYRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKNDENGGTPISIVDFAVPIIMKGELMKILDQRVEPPEMNETEAVELVSYTAMHCVHLEGKDRPTISDIVANLERAFTLCDSSSHGSISSATISIGSD* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2822 805 ProSitePatterns Protein kinases ATP-binding region signature. 501 523 IPR017441 GO:0005524
Mtr5g2822 805 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 7 802 IPR044815 GO:0004674
Mtr5g2822 805 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 7 802 - -
Mtr5g2822 805 ProSiteProfiles Protein kinase domain profile. 495 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2822 805 Pfam Protein kinase domain 496 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2822 805 SMART serkin_6 495 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2822 805 Pfam Regulator of chromosome condensation (RCC1) repeat 249 274 - -
Mtr5g2822 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Mtr5g2822 805 SUPERFAMILY Protein kinase-like (PK-like) 472 780 IPR011009 -
Mtr5g2822 805 Gene3D Phosphorylase Kinase; domain 1 456 575 - -
Mtr5g2822 805 Gene3D - 124 341 IPR009091 -
Mtr5g2822 805 MobiDBLite consensus disorder prediction 447 479 - -
Mtr5g2822 805 Gene3D Transferase(Phosphotransferase) domain 1 576 794 - -
Mtr5g2822 805 SUPERFAMILY RCC1/BLIP-II 28 275 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2822 Mtr-Chr5 36756105 36758838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2822 1 805 Receptor kinase-like Gene Family AT3G55950 57.711 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mtr5g2822 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2822 - - gmx:100782916 1191.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2169 3 35247874 35250705 Mtr5g2822 5 36756105 36758838 ECH
Mtr5g2822 5 36756105 36758838 Mtr5g2822 5 36756105 36758838 ECH