Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2820 ATGGCGCCTTCTTCTCCGAGCAACACCGCTTCGCAACTTTCTTCAACCGCTACAGAAAATGATCTTCAGCCATTCTTTGTGCTACATAAAGCTTCACCTAGGAGAAAAGATAGAACATCAGCAGGACAGGGAAAATCTCGCAAAAGAAATAAGTTATCTCCTCGATTGCCACATAGTGCAAAGAAACAGGAAGAAAGTACAGATGAAGAGTGTGATCGCTATTTGTGTCAGCAACAGCAGATTGAAGCTTTTGATATTGTTTGGACAAAAATTGAATCTACTATTAAGGATGTCCTGAGAGAGCTCAATGCTAGTGTATTCAATATTATACAAAAATGGGTTCAGGAGTGCTTCAATACTACTAGATTGGTTGGAGAACCTAGCATTTCTGTAGCAACTCGGTCTTTTCCTGTTCTATCTAATACAACTCCTGGGAAGTTGTACAGCGCATTAGTTGTTACCAGAAACATAGAGTTTGTTGATGACATAATGACATTTGAAGAGCTTGGCATATTCTTGAAATCCCATGGATGTCATGTGGCTATGCTTTCATCAATGGAGTTTTCGTTGAAAAATGGAATTGCTGGTTGCTTGAAAGCTTTATTGCGAGAGTTTCTAGGGAATTCTTTCGATCCAGCTGATATATCTGCCTTAGCATCATGGTATAGAGAACAAGAAAACTACAATAAACCACTAGTTCTGATCGTTAATGATTTGGAAAGGTGTTGCGGATCAGTCTTAACTGAGTTTATCCTGATGTTGAGTGAATGGGTTATCAAGGTGCCAATATTCTTAATATTTGGAGTTGCAACGACAGTGGATGCCCCAAGAAACATTTTTCCATCACATGCTCTTGAGTGTTTCTGCCCCTCTATGTTTATGCTTGTAACGCCAGCTGAGAGAATGGATGCAATTGTTGAGGCTATTCTTGTAAAACATTGCACCACATTTAATATTGGTCATAAAGTGGCACAGTTACTGAGAAATTACTTCATCAATCAGGATGGGACAGTAACATCTTTTATAAGAGCTTTGAAGGTAGCATGCTTATTACACTTCTCTATGGAACCTTTGAGTCTCATACAAGGGAGAATTCTCGTTGAAGATCAGGAAGGAAGCTCTGGATTATCACCTGAGACTTTGTTGAAATGCATGCACGAACTTCCATCGCATGCAAGGAATATAATGGTTGACCAGACTAACGAGAGCATGGCTGAAGGTTTGTCAGAATTGGTGACAGTGCAGAAACTATGGAGCACTGTGGTTCTCTGCCTATACGAGGCTGGAAAATATAGCAGAGTGCAGCTGCTGGATTTGTTTTGTGAATCCCTCAATCATGTTTTGTACCCATCAAGAGATTCGGTTATGAGTGATGAAAAAGACCATGGGTTGTCCTCAACAAACGATCCCTTTCAGCAATATTCTATCATGCAAAGTGGAGGTTTAATTTGCCAGATAGCACGCAGAGTAAGGGATCTCCCTCCAGGAAAGCTAGATCAATTGATTGAGAGTTGGGATAAAATTACCGCAGATATTTCAGAGATTCATGAGAAACTGAAAATCTTGCAATCTTCAGTAAGATGTCAAGATGGAAAGAGTTCACGCAGGAGTTCCAAGGACATTAACAAGAGATGTGACAAGGACTCAAGAATGTCAAACTTGCAAGCTATCGCATTTCTGGATGATTTAGTTAGAAACTATTTGAGGCCCATTGAAGGAATGCCTTTCAATGAAATTTTCTGCTTCAAAAATGTTGAGAAGCTTCAATCGGTTCTGATTGGAGATCCAAGGAGAAGGATTCAAGTTGATCTGTTGGAGTTTCATAATATATTATGTTGCAGTTGCTGTAACAAGAGTGGCAAGGGCCTATTGCCATCCAGGCACGATTCCTCAATTATGTACTCACTAGCTCAAGAGCACGGAGATCTTATCAATCTTCATGATTGGTTCCAGTCTTTTAGAACAATTGTTCTTCAAAATACAAATAAAAGGAAGCAAAAATCAAAGCAGACCCCCTTATCAAAGAAGAGAAAAGAAATGAATGGATCTGCAGACCAAAATGAAGCCTCAATCCAAGCGCGATTTTGCAGGGGAATTACAGAGCTGCAGATCACTGGTCTAGTTAGAATGCCTAGCAAGAGACGTCCAGACTTTGTACAGAGAATAGCATTTGGAATTTGA 2181 0.3989 MAPSSPSNTASQLSSTATENDLQPFFVLHKASPRRKDRTSAGQGKSRKRNKLSPRLPHSAKKQEESTDEECDRYLCQQQQIEAFDIVWTKIESTIKDVLRELNASVFNIIQKWVQECFNTTRLVGEPSISVATRSFPVLSNTTPGKLYSALVVTRNIEFVDDIMTFEELGIFLKSHGCHVAMLSSMEFSLKNGIAGCLKALLREFLGNSFDPADISALASWYREQENYNKPLVLIVNDLERCCGSVLTEFILMLSEWVIKVPIFLIFGVATTVDAPRNIFPSHALECFCPSMFMLVTPAERMDAIVEAILVKHCTTFNIGHKVAQLLRNYFINQDGTVTSFIRALKVACLLHFSMEPLSLIQGRILVEDQEGSSGLSPETLLKCMHELPSHARNIMVDQTNESMAEGLSELVTVQKLWSTVVLCLYEAGKYSRVQLLDLFCESLNHVLYPSRDSVMSDEKDHGLSSTNDPFQQYSIMQSGGLICQIARRVRDLPPGKLDQLIESWDKITADISEIHEKLKILQSSVRCQDGKSSRRSSKDINKRCDKDSRMSNLQAIAFLDDLVRNYLRPIEGMPFNEIFCFKNVEKLQSVLIGDPRRRIQVDLLEFHNILCCSCCNKSGKGLLPSRHDSSIMYSLAQEHGDLINLHDWFQSFRTIVLQNTNKRKQKSKQTPLSKKRKEMNGSADQNEASIQARFCRGITELQITGLVRMPSKRRPDFVQRIAFGI* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2820 726 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 11 725 IPR020795 GO:0003677|GO:0005664|GO:0006260
Mtr5g2820 726 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 11 725 - -
Mtr5g2820 726 MobiDBLite consensus disorder prediction 661 687 - -
Mtr5g2820 726 Pfam Origin recognition complex winged helix C-terminal 597 724 IPR040855 -
Mtr5g2820 726 MobiDBLite consensus disorder prediction 1 69 - -
Mtr5g2820 726 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 63 360 IPR045667 -
Mtr5g2820 726 MobiDBLite consensus disorder prediction 1 22 - -
Mtr5g2820 726 MobiDBLite consensus disorder prediction 30 44 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2820 3 700 Core DNA Replication Machinery Family AT5G16690 44.755 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2820 K02605 - gmx:100780646 1096.65