Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2810 ATGAGAACTCATTCCCAATTGCTGTTGTACTTCATGCTGTCAACAACAGTTGCTCTTGCTTTGAGTTTGAGTTCAGTGACTGATAAACATGCTTTGCTTTCTTTGAAAGAAAAACTTACCAATGGTATACCTGATGCTCTTCCATCATGGAATGAATCTCTTTATTTCTGTGAATGGGAGGGTGTTACATGCGGTCGACGCCACATGAGAGTCTCTGTCTTGCATTTGGAAAATCAAAATTGGGGTGGTACTCTTGGACCATCCTTAGGAAATCTAACCTTTCTCAGAAAACTCAAACTTTCCAACATCGATTTGCACGGTGAAATTCCAAAAGAAGTTGGTCTTTTGAAGAGGTTGCAAGTTCTTGACTTGAGCAAGAACAAATTTCATGGTAAGATTCCTTTTGAGCTTACCAACTGCACCAATCTTCAAGAAATTATCTTGTTGTACAATCAACTCACTGGAAATGTTCCCTCATGGTTTGGTTCCATGACGCAGCTTAATAAGTTGCTTCTTGGAGCAAATAATTTGGTAGGTCAAATCCCACCTTCCTTGGGAAATATTTCATCCCTCCAAAATATAACACTTGCAAGAAATCAATTGGAAGGAAATATACCTTATACCTTGGGTAAGTTATCAAATTTAAGAGATCTAAATCTGGGTTCAAATAATTTTTCGGGTGAAATCCCTCATTCTCTTTACAATCTATCAAAAATTTATGTTTTCATCCTTGGGCAAAACCAATTATTTGGTACTCTTCCATCAAATATGCATCTTGTTTTTCCTAATCTTAGATCATTTTTGGTGGGAGAGAACCACATAAGCGGAACTTTGCCGTTGTCAATATCAAATATCACCGGTCTGAAATGGTTCGATATATCCATTAACAATTTTCATGGGCCAGTACCTCCAACCTTGGGGCACTTGAACAAACTTAGGAGGTTTGACATTGGTTATAATGGTTTTGGGAGTGGAAGAGCTCATGATTTGGATTTCATTTCCTCATTGACCAATTGTACTCAATTGCAAGTTCTTAATTTGAAGTATAATAGATTTGGCGGTACAATGACAGATCTTATGACCAACTTCTCTACCACTCTCAATTGGCTAAGTATGGCAGGTAATCAAATATATGGAGAAATCCCTGAAAGAATTGGACAACTAATTGGTTTAACTCACTTTGATATGATGGAGAATTTCCTAGAGGGAACAATTCCAGATTCAATTGGAAAGCTTACGAATCTAGTAAGATTAATTTTGCAAGAAAACAGATTATCTGGCAAGATTCCTATTGTTATTGGCAATCTTACCAAGTTGTCTGAGTTTTATCTACATACTAATAAATTAGAAGGAAACGTTCCATCGACTCTTAGATATTGCACCAAGTTGCAATCATTTGGTGTTTCTGACAACAACTTGAGTGGCCACATACCTGATCAAACATTTGGCTATCTAGAAAGTTTAATAAATCTTGACTTGTCCAACAACTCCTTGACCGGTCCCATTCCTTCAGAATTTGGTAACTTGAAGCATCTTTCCATATTGAATCTATACACAAACAAGTTGTCCGGTCAAATTCCCAATGAACTTGCTGGTTGTTTGACACTAATTGAGCTTATGTTGCAGAGAAACTTTTTCCATGGAAGTATACCTTCCTTCTTGGGCTCCTCATTAAGATCCCTCCAAATCTTAGACCTTTCTAGCAATAACTTCACGAGTGTAATCCCTCGTGAATTGGAAAATCTAACATCGTTGAATTCTTTAAACCTGTCATTTAACAATCTCTATGGTGAGGTTCCCATAAATGGTGTCTTTAGCAATGTCACTGCAATTTCACTTATGGGAAACAATGATCTTTGTGAAGGTATTCCTCAATTAAAGCTGCCTCCATGTTCTAGGTTGCTCTCCAAGAAACATACGAGGTTTCTTAAAAAGAAGTTTATCCCCATCTTTGTTATTGGTGGAATTTTGATCTCTTCGATGGCTTTTATCGGTATCTATTTTCTCAGGAAAAAGGCAAAAAAGTTTCTTTCTTTAGCATCTCTACGGAATGGGCACTTGGAGGTTACTTATGAGGATTTACATGAAGCAACCAACGGATTTTCTTCATCCAACTTGGTAGGCGCAGGAAGTTTTGGTTCTGTATACAAAGGATCTCTTCTTAAATTTGAAGGACCTATTGTAGTAAAGGTGTTGAAACTTGAAACACGTGGGGCATCAAAGAGTTTTGTGGCTGAATGTAAAGTACTGGAAAAGATGAAACACAAAAACCTTCTGAAGCTCCTAACTTTCTGTTCAAGTATTGATTATAATGGTGAAGTTTTCAAGGCTATAGTTTTTGAATTCATGCCTATGGGGAGTCTAGAAGGCTTGTTGCACAATAATGAACATCTTGAGTCTAGAAATCTAAATCTCAGACAAAGGTTAAGTGTTGCTCTCGATGTAGCCCATGCATTGGATTATCTTCACCATAATTCCCATGAAGCTGTAGTTCACTGTGATATTAAGCCAAGTAATGTTCTTCTCGACGATGACATTATTGCTTACTTAGGAGATTTTGGGTTAGCAAGGTTCCTTAATGGGGCTACAGGGAGTTCCAGTAAAGATCAAGTTAGTTCAGCTGCAATTCAAGGAACCATAGGATATGTTCCCCCAGAGTATGGAGTAGGTGGCAAAGTATCACCACAAGGAGATATTTACAGCTATGGAATTCTATTGTTGGAGATGTTAACAGCAAAAAAACCAACAGACAACATGTTTTGTGAAGGTCTAAGCCTACACAAATTATGTAAGATGGCAATCCCACAAAAGATCACTGAGATAGCAGATACACAGTTGCTTGTCCCATCTTCTGAAGAACAGACAGGGATTATGGAGGATCAGAGGGAGAGTCTAGTCTCGTTTGCTAGGATTGGAGTTGCATGTTCCGCAGAATACCCCGCTCAGCGAATGTGTATAAAAGATGTTATAACAGAGTTACATGCAATTAAACAGAAGTTAACCCTCTAG 3009 0.3785 MRTHSQLLLYFMLSTTVALALSLSSVTDKHALLSLKEKLTNGIPDALPSWNESLYFCEWEGVTCGRRHMRVSVLHLENQNWGGTLGPSLGNLTFLRKLKLSNIDLHGEIPKEVGLLKRLQVLDLSKNKFHGKIPFELTNCTNLQEIILLYNQLTGNVPSWFGSMTQLNKLLLGANNLVGQIPPSLGNISSLQNITLARNQLEGNIPYTLGKLSNLRDLNLGSNNFSGEIPHSLYNLSKIYVFILGQNQLFGTLPSNMHLVFPNLRSFLVGENHISGTLPLSISNITGLKWFDISINNFHGPVPPTLGHLNKLRRFDIGYNGFGSGRAHDLDFISSLTNCTQLQVLNLKYNRFGGTMTDLMTNFSTTLNWLSMAGNQIYGEIPERIGQLIGLTHFDMMENFLEGTIPDSIGKLTNLVRLILQENRLSGKIPIVIGNLTKLSEFYLHTNKLEGNVPSTLRYCTKLQSFGVSDNNLSGHIPDQTFGYLESLINLDLSNNSLTGPIPSEFGNLKHLSILNLYTNKLSGQIPNELAGCLTLIELMLQRNFFHGSIPSFLGSSLRSLQILDLSSNNFTSVIPRELENLTSLNSLNLSFNNLYGEVPINGVFSNVTAISLMGNNDLCEGIPQLKLPPCSRLLSKKHTRFLKKKFIPIFVIGGILISSMAFIGIYFLRKKAKKFLSLASLRNGHLEVTYEDLHEATNGFSSSNLVGAGSFGSVYKGSLLKFEGPIVVKVLKLETRGASKSFVAECKVLEKMKHKNLLKLLTFCSSIDYNGEVFKAIVFEFMPMGSLEGLLHNNEHLESRNLNLRQRLSVALDVAHALDYLHHNSHEAVVHCDIKPSNVLLDDDIIAYLGDFGLARFLNGATGSSSKDQVSSAAIQGTIGYVPPEYGVGGKVSPQGDIYSYGILLLEMLTAKKPTDNMFCEGLSLHKLCKMAIPQKITEIADTQLLVPSSEEQTGIMEDQRESLVSFARIGVACSAEYPAQRMCIKDVITELHAIKQKLTL* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2810 1002 ProSitePatterns Protein kinases ATP-binding region signature. 707 730 IPR017441 GO:0005524
Mtr5g2810 1002 Pfam Leucine rich repeat 537 595 IPR001611 GO:0005515
Mtr5g2810 1002 Pfam Leucine rich repeat 462 522 IPR001611 GO:0005515
Mtr5g2810 1002 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Mtr5g2810 1002 Gene3D Transferase(Phosphotransferase) domain 1 783 1001 - -
Mtr5g2810 1002 PRINTS Leucine-rich repeat signature 488 501 - -
Mtr5g2810 1002 PRINTS Leucine-rich repeat signature 582 595 - -
Mtr5g2810 1002 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 25 1001 - -
Mtr5g2810 1002 Pfam Protein kinase domain 703 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2810 1002 Gene3D Phosphorylase Kinase; domain 1 665 782 - -
Mtr5g2810 1002 ProSiteProfiles Protein kinase domain profile. 701 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2810 1002 SUPERFAMILY L domain-like 364 621 - -
Mtr5g2810 1002 SMART serkin_6 701 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2810 1002 PANTHER LRR RECEPTOR-LIKE KINASE 25 1001 - -
Mtr5g2810 1002 Gene3D Ribonuclease Inhibitor 180 324 IPR032675 -
Mtr5g2810 1002 SUPERFAMILY L domain-like 25 322 - -
Mtr5g2810 1002 Coils Coil 788 808 - -
Mtr5g2810 1002 Gene3D Ribonuclease Inhibitor 326 633 IPR032675 -
Mtr5g2810 1002 SUPERFAMILY Protein kinase-like (PK-like) 679 993 IPR011009 -
Mtr5g2810 1002 SMART LRR_typ_2 582 607 IPR003591 -
Mtr5g2810 1002 SMART LRR_typ_2 164 188 IPR003591 -
Mtr5g2810 1002 SMART LRR_typ_2 412 436 IPR003591 -
Mtr5g2810 1002 SMART LRR_typ_2 212 236 IPR003591 -
Mtr5g2810 1002 SMART LRR_typ_2 485 508 IPR003591 -
Mtr5g2810 1002 SMART LRR_typ_2 558 581 IPR003591 -
Mtr5g2810 1002 SMART LRR_typ_2 116 140 IPR003591 -
Mtr5g2810 1002 SMART LRR_typ_2 509 533 IPR003591 -
Mtr5g2810 1002 ProSiteProfiles Leucine-rich repeat profile. 560 583 IPR001611 GO:0005515
Mtr5g2810 1002 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Mtr5g2810 1002 Gene3D Ribonuclease Inhibitor 25 179 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2810 Mtr-Chr5 36632915 36636157 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2810 27 1000 Receptor kinase-like Gene Family AT3G47570 43.712 0.0 774
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr5g2810 Pkinase 1.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2810 - - gmx:100777490 1306.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2810 5 36632915 36636157 Mtr5g2810 5 36632915 36636157 ECH