Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2809 ATGAGAACTCATTCCCAATTGCTGTTGTACTTCATGCTGTCAACAACAGTTGCTCTTGCTTTGAGTTTGAGTTCAGTGACTGATAAACATGCTTTGCTTTCTTTGAAAGAAAAACTTACCAATGGTATACCTGATGCTCTTCCATCATGGAATGAATCTCTTCATTTCTGTGAATGGGAGGGTGTTACATGCGGTCGACGCCACATGAGAGTCTCTGTCTTGCATTTGGAAAATCAAAATTGGGGTGGTACTCTTGGACCATCCTTAGGAAATCTAACCTTTCTCAGAAAACTCAAACTTTCCAACATCGATTTGCACGGTGAAATTCCAAAAGAAGTTGGTCTTTTGAAGAGGTTGCAAGTTCTTGACTTGAGCAAGAACAAATTTCATGGTAAGATTCCTTTTGAGCTTACCAACTGCACCAATCTTCAAGAAATTATCTTGTTGTACAATCAACTCACTGGAAATGTTCCCTCATGGTTTGGTTCCATGACGCAGCTTAATAAGTTGCTTCTTGGAGCAAATAATTTGGTAGGTCAAATCCCACCTTCCTTGGGAAATATTTCATCCCTCCAAAATATAACACTTGCAAGAAATCAATTGGAAGGAAATATACCTTATACCTTGGGTAAGTTATCAAATTTAAGAGATCTAAATCTGGGTTCAAATAATTTTTCGGGTGAAATCCCTCATTCTCTTTACAATCTATCAAAAATTTATGTTTTCATCCTTGGGCAAAACCAATTATTTGGTACTCTTCCATCAAATATGCATCTTGTTTTTCCTAATCTTAGATCATTTTTGGTGGGAGGGAACCACATAAGCGGAACTTTTCCGTGTTCAATATCCAACCTCACTGAATTACGATGGTTTGATATATCATGGAATGGTTTTAATGGACAGATACCTCTAACTTTGGGATCGTTAAACAAACTCAAGAGGATTCGAGTTGATAATAATAATTTTGGAAGTGGTGGATCTCACGATTTGAACTTTCTTTCCTCATTAACCAATTGTACTAAGTTGGAACAACTAATTTTGGATGGAAATGGATTTGGTGGTGTCTTGCCTTATTATGTAGGCAACCTTTCTACCTATCTTAGTGTGCTTAGTATGGCAAAAAATCAAATATACGGAGTGATACCTGAAAGTTTGGGACAACTAATCAATTTAACTGAATTCGATATGATGAGGAATTTCCTTGAGGGAAAGATTCCAAATTCAATTGGAAAACTGAAGAATCTAGGAAGACTGGTCTTGCAACAAAACAGTTTATCTGGTAATATTACTACTATTGGTAACCTTACTACGTTGTTTGAACTTTATCTTCATACCAATAATTTTGAAGGAAGTATTCCAATAACCCTTAGACATTGCACTCAATTACAGACATTTGGTATTTCTACGAATAATTTGAGTGGTGATATACCTGATCATCTATTTGGCTATCTAGAAAATTTAATAAACCTTGACTTGTCTAATAACTCTCTGACTGGTCCCCTTCCTTTAGGGTTTGGTAACTTGAAGCATCTTTCTCTATTGTACCTATATGAAAACAAGTTGTCTGGTGAAATTCCGAGTGACCTTGGCACTTGTTTATCATTAACAGAGCTTATACTGGAGAGAAACTTTTTCCATGGCAGTATACCTTGGTTCTTGGGATCATTAAGATCCCTAGAAGTCTTAGACATTTCAAATAATAGTTTTTCAAGCACAATCCCCCTTGAACTAGAAAATTTAGTATATTTGAATACTTTGGACTTGTCTTTTAACAATCTTTATGGTGAGGTTCCCACAAGAGGTGTCTTCAGCAACGTCTCCGCAATTAATTCCCTAACTGGAAACAAGAACCTTTGTGGAGGAATACCTCAATTGAAACTTCCTCCATGTCTTAAGGTACCTGCCAAGAAGCACAAAAGAACTCCAAAAGAAAAACTTATCCTCATCAGTGTAATTGGTGGGGTTGTGATCTCTGTCATAGCTTTTACAATTGTTCACTTTCTCACGAGAAAGCCCAAAAGGTTATCTTCTTCACCATCTTTGATAAACGGGAGCTTGAGGGTTACTTATGGAGAGCTACATGAAGCAACCAATGGATTTTCTTCATCCAATTTGGTCGGTACAGGAAGCTTCGGTTCTGTTTACAAAGGATCTCTTCTCTACTTTGAAAAACCTATTGCTGTAAAGGTGTTGAATCTTGAAACACGTGGAGCAGCAAAGAGTTTCATGGTGGAATGCAATGCTTTAGGAAAGATGAAGCACCGTAATCTTGTGAAAATCCTAACTTGCTGTTCAAGTGTTGATTATAATGGTGAAGATTTTAAGGCCATTGTTTTTGAGTTCATGCCTAGTGGGAATCTAGAAAACCTGTTGCATGGTAACGAAGATCATGAGTCTAGAAATCTGAATCTCAATTTCACACAAAGGTTAGACATTGCTCTCGACGTAGCTCATGCATTGGATTATCTTCACAATGATACAGAGCAAGTTGTAGTTCATTGTGATGTTAAACCAAGCAATGTTCTTCTTGATGATGACGGTGTGACCCACTTAGGAGACTTTGGCGTAGCTAGGTTCCTCCATGGAGCTACAGAATATTCAAGTAAAAATCAAGTTATTTCCTCCACAATTAAAGGAACTATAGGATATATTCCTCCTGAGTATGGATCAGGTGGTATGGTATCACCACAGGGAGATATCTATAGCTATGGAATTGTTCTGTTAGAGATGCTTACTGGAAAGAGACCAACAGATAACATGTTTTATGAGAATTTAAGTTTACACAAATTCTGTAAGATGAGAATTCCTGAAGGAATTCTTGATGTAGTGGATTCATGCTTGCTTATGTCATTTGCTGAAGATCAAACACAAGTTATGGAAAACAACATAAAGGAGTGTTTAGTGATGTTTGCTAAAATAGGAATTGCATGTTCTGAAGAATTTCCTACTCAGAGAATGCTCACAAAAGATGTTATAGTTAAGTTGCTTGAAATTAAACGGAAATTGTCATCCTAG 3015 0.3685 MRTHSQLLLYFMLSTTVALALSLSSVTDKHALLSLKEKLTNGIPDALPSWNESLHFCEWEGVTCGRRHMRVSVLHLENQNWGGTLGPSLGNLTFLRKLKLSNIDLHGEIPKEVGLLKRLQVLDLSKNKFHGKIPFELTNCTNLQEIILLYNQLTGNVPSWFGSMTQLNKLLLGANNLVGQIPPSLGNISSLQNITLARNQLEGNIPYTLGKLSNLRDLNLGSNNFSGEIPHSLYNLSKIYVFILGQNQLFGTLPSNMHLVFPNLRSFLVGGNHISGTFPCSISNLTELRWFDISWNGFNGQIPLTLGSLNKLKRIRVDNNNFGSGGSHDLNFLSSLTNCTKLEQLILDGNGFGGVLPYYVGNLSTYLSVLSMAKNQIYGVIPESLGQLINLTEFDMMRNFLEGKIPNSIGKLKNLGRLVLQQNSLSGNITTIGNLTTLFELYLHTNNFEGSIPITLRHCTQLQTFGISTNNLSGDIPDHLFGYLENLINLDLSNNSLTGPLPLGFGNLKHLSLLYLYENKLSGEIPSDLGTCLSLTELILERNFFHGSIPWFLGSLRSLEVLDISNNSFSSTIPLELENLVYLNTLDLSFNNLYGEVPTRGVFSNVSAINSLTGNKNLCGGIPQLKLPPCLKVPAKKHKRTPKEKLILISVIGGVVISVIAFTIVHFLTRKPKRLSSSPSLINGSLRVTYGELHEATNGFSSSNLVGTGSFGSVYKGSLLYFEKPIAVKVLNLETRGAAKSFMVECNALGKMKHRNLVKILTCCSSVDYNGEDFKAIVFEFMPSGNLENLLHGNEDHESRNLNLNFTQRLDIALDVAHALDYLHNDTEQVVVHCDVKPSNVLLDDDGVTHLGDFGVARFLHGATEYSSKNQVISSTIKGTIGYIPPEYGSGGMVSPQGDIYSYGIVLLEMLTGKRPTDNMFYENLSLHKFCKMRIPEGILDVVDSCLLMSFAEDQTQVMENNIKECLVMFAKIGIACSEEFPTQRMLTKDVIVKLLEIKRKLSS* 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2809 1004 Gene3D Ribonuclease Inhibitor 485 628 IPR032675 -
Mtr5g2809 1004 Gene3D Ribonuclease Inhibitor 209 430 IPR032675 -
Mtr5g2809 1004 PRINTS Leucine-rich repeat signature 487 500 - -
Mtr5g2809 1004 PRINTS Leucine-rich repeat signature 556 569 - -
Mtr5g2809 1004 ProSiteProfiles Protein kinase domain profile. 700 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2809 1004 Gene3D Ribonuclease Inhibitor 24 208 IPR032675 -
Mtr5g2809 1004 SMART serkin_6 700 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2809 1004 SUPERFAMILY L domain-like 337 620 - -
Mtr5g2809 1004 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 25 1003 - -
Mtr5g2809 1004 Gene3D Transferase(Phosphotransferase) domain 1 782 1004 - -
Mtr5g2809 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 831 843 IPR008271 GO:0004672|GO:0006468
Mtr5g2809 1004 Pfam Protein kinase domain 702 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2809 1004 SMART LRR_typ_2 484 507 IPR003591 -
Mtr5g2809 1004 SMART LRR_typ_2 556 579 IPR003591 -
Mtr5g2809 1004 SMART LRR_typ_2 164 188 IPR003591 -
Mtr5g2809 1004 SMART LRR_typ_2 116 140 IPR003591 -
Mtr5g2809 1004 SMART LRR_typ_2 508 532 IPR003591 -
Mtr5g2809 1004 SMART LRR_typ_2 212 236 IPR003591 -
Mtr5g2809 1004 SMART LRR_typ_2 580 605 IPR003591 -
Mtr5g2809 1004 ProSitePatterns Protein kinases ATP-binding region signature. 706 729 IPR017441 GO:0005524
Mtr5g2809 1004 SUPERFAMILY Protein kinase-like (PK-like) 673 992 IPR011009 -
Mtr5g2809 1004 Gene3D Phosphorylase Kinase; domain 1 664 781 - -
Mtr5g2809 1004 Gene3D Ribonuclease Inhibitor 431 483 IPR032675 -
Mtr5g2809 1004 SUPERFAMILY L domain-like 25 322 - -
Mtr5g2809 1004 PANTHER LRR RECEPTOR-LIKE KINASE 25 1003 - -
Mtr5g2809 1004 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2809 Mtr-Chr5 36619606 36624817 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2809 27 1002 Receptor kinase-like Gene Family AT3G47570 43.984 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr5g2809 Pkinase 7.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2809 - - gmx:100777490 1336.63