Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2805 ATGAGGAATAGTATGATGTTTCTTTTCTGCTTTGCTAGCCAAATGTTGGTGTATTATTTCATACCATCAACAGCTGCTGCTCTTTCTTTGAGTTCGCAGACTGATAAGCTTGCTTTGAAGGAAAAGCTCACAAATGGTGTACCAGACTCTCTTCCATCATGGAATGAGTCTTTACATTTCTGTGAATGGCAAGGAGTTACATGTGGTCGTCGTCACATGAGAGTCTCTGCCTTGCATTTGGAAAATCAAACACTGGGTGGCACTCTCGGACCATCATTGGGAAATCTAACATTTATCAGAAGACTAAAGCTTAGAAATGTTAATTTGCATGGTGAAATTCCAAGTCAGGTTGGTCGTTTAAAGCGATTGCATCTTCTTGACTTAAGCGACAACAATCTTCATGGTGAGGTTCCTATGGAACTCTCTAACTGCACGACCATCAAGGGAATTTTTTTAGGAATCAATCGACTCACCGGAAGAATTCCGAAATGGTTTGGGTCAATGATGCAACTTACTCAACTGAATCTCGTTGCCAATAATCTAGTTGGTACTATTCCATCATCCATGGGAAATGTTTCATCACTCCAAAATATATCACTTGGACAAAATCACTTGAAAGGAAGAATACCTTGTTCTTTGGGTATGTTGTCAAGTTTGAAAATGTTGATTCTACATTCAAATAATTTGTCAGGTGAAATTCCTCATTCTCTTTACAACCTATCAAATATTCAAGTTTTTGATCTTGGGTTAAACAACTTATCCGGTAGTCTTCCAACCAATCTGAATCTTGTTTTTCCCAATCTTATAGCATTCCTAGTATCAACCAACCAAATAAGCGGACCTTTTCCGTTTTCAGTATCCAACCTCACTGAATTGAAAATGTTTGATATATCATATAATAGTTTGCATGGGACAATACCTCTTACTTTGGGTCGATTAAATAAACTTGAATGGTTTAATATTGGAGGAGTTAATTTTGGGAATGGAGGAGCTCACGATTTGGATTTTCTTTCATCGTTAACCAACTGTACACAATTGTCAATGATCTATCTTTTTAACAATAATTTTGGTGGTGTTTTGCCGAACCTTATAGGAAACTTTTCCACTCATCTTCGTTTGCTTCATATGGAGTCTAATCAAATACATGGAGTGATACCTGAAACAATTGGACAACTAATCGATTTAACAGTCTTGGAAATTTCAAACAATTTATTTGAGGGAACAATTCCTGAATCAATTGGAAAGCTTAAGAATCTAGGAATATTGGGCTTGGATGGTAACAAATTATCTGGTAAAATTCCTATAGTCATTGGCAATCTTACAGTCTTGTCTGAACTAGGTCTATCTAGTAATAAATTGGAAGGAAGCATTCCATTTACCATAAGAAATTGCACCAAATTGCAGAAATTATATTTTTATAGTAACAACTTGAGTGGTGATATTCCCAATCAAACATTTGGCTATCTAGATGGTTTAATATATCTTGGCTTAGCCAATAATTCCTTGACCGGTCCCATTCCTTCAGAGTTTGGTAACTTGAAACAACTTTCACAATTGTATCTAGGCTTAAATAAGTTGTCTGGTGAAATTCCTAGGGAACTAGCTTCTTGCTTGGCATTGACAGTACTTGGATTGGGGGGAAACTTCTTTCATGGAAGTATACCTTTGTTCTTGGGTTCCTCTTTAAGGTCCCTTGAAATCTTAGACCTTTCTGGCAATAATTTTTCAAGCATAATCCCCTCTGAACTAGAAAATCTAACATTTTTGAATACTTTGGACTTGTCTTTTAACAATCTTTATGGTGAGGTTCCCACAAGAGGTGTCTTCAGCAAGATCTCCGCAATTTCACTAACTGGAAACAAGAACCTTTGTGGAGGAATACCTCAATTGAAACTTCCTCCATGTCTTAAGGTACCTGCCAAGAAGCACAAAAGAACTCCAAAAAAGAAACTTATCCTCATCAGTGTAATTGGTGGGGTTGTGATCTCTGTCATAGCTTTTACAATCGTTCACTTTCTCACGAGAAAGCCCAAAAGGTTATCTTCTTCACCATCTTTGATAAACGGGAGCTTGAGGGTTACTTATGGAGAGCTACATGAAGCAACCAATGGATTTTCTTCATCCAATTTGGTCGGTACAGGAAGCTTCGGTTCTGTTTACAAAGGATCTATTCTCTACTTTGAAAAACCTATTGCTGTAAAGGTGTTGAATCTTGAAACACGTGGAGCAGCAAAGAGTTTCATTGCGGAATGCAATGCTTTAGGAAAGATGAAGCACCGTAATCTTGTCAAAATCCTAACTTGTTGTTCAAGTGTTGATTATAATGGTGAAGATTTTAAGGCCATTGTTTTTGAGTTCATGCCTAGTGGGAATCTGGAAAACCTGTTGCATGGTAACGAAGATCATGAGTCTAGAAATCTGAATCTCAATTTCACACAAAGGTTAGACATTGCTCTCGACGTAGCTCATGCATTGGATTATCTTCACAATGATACAGAGCAAGTTGTAGTTCATTGTGATGTTAAGCCAAGCAATGTTCTTCTTGATGATGACGGTGTGGCCCACTTAGGAGACTTTGGCTTAGCTAGGTTCCTCCATGGAGCTACAGAATATTCAAGTAAAAATCAAGTTATTTCCTCCACAATTAAAGGAACTATAGGATATATTCCTCCTGAGAATGGATCAGGTGGTATGGTATCACCACAGGGAGATATCTATAGCTATGGAATTCTTCTGTTAGAGATGCTTACTGGAAAGAGACCAACAGATAACATCTTTTGTGAGAATCTAAGCTTACACAAATTTTGTAAGATGAAAATTCCAGAAGGAATTCTTGATATAGTGGATCCATGCTTGCTTGTGTCATTTGTTGAAGATCAAACAAAGGTTGTGGAAAGTAGCATAAAGGAGTGTCTAGTGATGTTTGCTAATATAGGAATTGCATGTTCTGAAGAATTCCCTACTCAGAGAATGCTCACAAAAGATATTATAGTGAAGTTGCTTGAAATTAAACAGAAATTACCGTGCTAG 3030 0.3723 MRNSMMFLFCFASQMLVYYFIPSTAAALSLSSQTDKLALKEKLTNGVPDSLPSWNESLHFCEWQGVTCGRRHMRVSALHLENQTLGGTLGPSLGNLTFIRRLKLRNVNLHGEIPSQVGRLKRLHLLDLSDNNLHGEVPMELSNCTTIKGIFLGINRLTGRIPKWFGSMMQLTQLNLVANNLVGTIPSSMGNVSSLQNISLGQNHLKGRIPCSLGMLSSLKMLILHSNNLSGEIPHSLYNLSNIQVFDLGLNNLSGSLPTNLNLVFPNLIAFLVSTNQISGPFPFSVSNLTELKMFDISYNSLHGTIPLTLGRLNKLEWFNIGGVNFGNGGAHDLDFLSSLTNCTQLSMIYLFNNNFGGVLPNLIGNFSTHLRLLHMESNQIHGVIPETIGQLIDLTVLEISNNLFEGTIPESIGKLKNLGILGLDGNKLSGKIPIVIGNLTVLSELGLSSNKLEGSIPFTIRNCTKLQKLYFYSNNLSGDIPNQTFGYLDGLIYLGLANNSLTGPIPSEFGNLKQLSQLYLGLNKLSGEIPRELASCLALTVLGLGGNFFHGSIPLFLGSSLRSLEILDLSGNNFSSIIPSELENLTFLNTLDLSFNNLYGEVPTRGVFSKISAISLTGNKNLCGGIPQLKLPPCLKVPAKKHKRTPKKKLILISVIGGVVISVIAFTIVHFLTRKPKRLSSSPSLINGSLRVTYGELHEATNGFSSSNLVGTGSFGSVYKGSILYFEKPIAVKVLNLETRGAAKSFIAECNALGKMKHRNLVKILTCCSSVDYNGEDFKAIVFEFMPSGNLENLLHGNEDHESRNLNLNFTQRLDIALDVAHALDYLHNDTEQVVVHCDVKPSNVLLDDDGVAHLGDFGLARFLHGATEYSSKNQVISSTIKGTIGYIPPENGSGGMVSPQGDIYSYGILLLEMLTGKRPTDNIFCENLSLHKFCKMKIPEGILDIVDPCLLVSFVEDQTKVVESSIKECLVMFANIGIACSEEFPTQRMLTKDIIVKLLEIKQKLPC* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2805 1009 SMART LRR_typ_2 562 585 IPR003591 -
Mtr5g2805 1009 SMART LRR_typ_2 586 611 IPR003591 -
Mtr5g2805 1009 SMART LRR_typ_2 216 240 IPR003591 -
Mtr5g2805 1009 SMART LRR_typ_2 289 313 IPR003591 -
Mtr5g2805 1009 SMART LRR_typ_2 120 144 IPR003591 -
Mtr5g2805 1009 SMART LRR_typ_2 392 416 IPR003591 -
Mtr5g2805 1009 SMART LRR_typ_2 440 464 IPR003591 -
Mtr5g2805 1009 SMART LRR_typ_2 513 537 IPR003591 -
Mtr5g2805 1009 ProSiteProfiles Leucine-rich repeat profile. 564 587 IPR001611 GO:0005515
Mtr5g2805 1009 PANTHER LRR RECEPTOR-LIKE KINASE 19 1009 - -
Mtr5g2805 1009 Gene3D Ribonuclease Inhibitor 155 263 IPR032675 -
Mtr5g2805 1009 Gene3D Transferase(Phosphotransferase) domain 1 787 1008 - -
Mtr5g2805 1009 SUPERFAMILY L domain-like 368 625 - -
Mtr5g2805 1009 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 19 1009 - -
Mtr5g2805 1009 Pfam Protein kinase domain 707 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2805 1009 Gene3D Ribonuclease Inhibitor 36 149 IPR032675 -
Mtr5g2805 1009 Gene3D Ribonuclease Inhibitor 331 643 IPR032675 -
Mtr5g2805 1009 Gene3D Phosphorylase Kinase; domain 1 669 786 - -
Mtr5g2805 1009 SUPERFAMILY L domain-like 52 325 - -
Mtr5g2805 1009 ProSitePatterns Protein kinases ATP-binding region signature. 711 734 IPR017441 GO:0005524
Mtr5g2805 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672|GO:0006468
Mtr5g2805 1009 Gene3D Ribonuclease Inhibitor 264 330 IPR032675 -
Mtr5g2805 1009 SUPERFAMILY Protein kinase-like (PK-like) 678 997 IPR011009 -
Mtr5g2805 1009 SMART serkin_6 705 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2805 1009 Pfam Leucine rich repeat N-terminal domain 37 68 IPR013210 -
Mtr5g2805 1009 Pfam Leucine rich repeat 466 526 IPR001611 GO:0005515
Mtr5g2805 1009 Pfam Leucine rich repeat 370 429 IPR001611 GO:0005515
Mtr5g2805 1009 ProSiteProfiles Protein kinase domain profile. 705 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2805 Mtr-Chr5 36572401 36575885 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2805 30 1007 Receptor kinase-like Gene Family AT3G47570 42.598 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr5g2805 Pkinase 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2805 - - mtr:MTR_1g029940 1384.01