Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2804 ATGAGGACTTTTATGTCGATATTTTTTCTTTGCTTTGCTAGCCAAATTTTGTTGCATTATTTCCTGTCATCAGCAATTACTGTTGCTTTTGCTTTGAGTTCACAGACTGATAAACTTGCTTTGCTTGCTTTGAAAGAAAAGCTTACAAATGGTGTGTCTGATTCTCTGCCATCATGGAATGAGTCTCTACATTTCTGTGAATGGCAAGGGATTACATGTGGTCGTCGTCACATGAGAGTCATTTCTTTGCATTTGGAGAATCAAATATTGGGTGGTACTCTCGGACCATCATTGGGAAATCTAACATTTCTTAGAAAACTCTACCTTTCAAACGTCGACTTGCATGGTGAAATTCCAAAACAAGTTGGTCGTTTGAAGCGGCTGCAAATTCTTCACTTAACCAACAACAGCAAACTTCAAGGAGAGATTCCTATGGAGCTCACTAATTGCTCAAATATCAAAGTAATTAATCTGGGCTTCAATCAACTCATTGGAAGAATTCCGACAAGGTTTGGGTCAATGATGCAACTCATTCGATTGAAACTCCGTGGCAATAATCTAGTTGGTACTATCCCATCCTCCCTAGGAAATGTTTCATCACTCCAAAATATATCACTTACACAAAATCACCTGGAAGGAAGCATACCTGATTCTTTGGGTAAGTTGTCAAGTTTGAATTTATTGTATCTAGGTGGAAATAATTTGTCAGGTGAAATTCCTCATTCACTTTACAACCTATCAAATATGAAATCTTTTGATCTTGGGGTAAACAACTTATTCGGTAGTCTTCCATCAAATATGAATCTTGTTTTTCCCAATCTTGTAGAATTCTTGGTAGGAGTGAATCAAATGACCGGGAATTTTCCGCCTTCAGTATTCAACCTCACTGAATTGCGATGGTTTGATTTAGGAGATAATTTTTTTAACGGGCCAATACTTCTTACTTTGGGTAGATTAATTAAACTTGAATTTTTTCAAATCGCCAAAAATAATTTTGGGAGTGGAAAGGCTCATGATTTGGACTTTCTTTTCCCGCTAACCAACTGCACTGAATTGACAGAGCTTGTTCTTCATGAAAATAGATTTGGTGGGGAATTGCCACATTTTACAGGAAACTTTTCAACCCATCTTAGTTGGCTTGATATGGGGATGAATCAAATATATGGAGCCATACCTAAAGGAATTGGACAACTTACCGGTTTAACATACTTAGACATAGGAAACAATTTCCTTGAGGGAACAATACCAAATTCAATTGGAAAGTTAAATAATCTAGTGAAATTGTTCTTGGGAGAAAACAAATTATATGGTAATATTCCTAATAGTATTGGCAATCTTACTATGTTGTCTGAACTATATTTGAATAGAAATAAATTTCAAGGAAGCATTCCATTTACCCTGAGATATTGTACCAACTTGCAGTCATTAAACATTTCTGATAACAAATTGAGTGGTCATATACCCAACCAAACAATTAGCTATCTAGAAAATTTAGTAGACCTTGACTTGTCTATAAACTCCCTGACTGGCCCCCTTCCTTTAGGGTTTGGTAACTTGAAGCATATTTCTAGTTTGTATCTAAATGAAAACAAGTTGTCTGGTGAAATCCCAAATGACCTAGGTGCTTGTTTTACATTAACAAAGCTTGTGTTGAAGAACAACTTTTTCCATGGAGGTATACCTTCATTCTTGGGTTCTTTAAGATCTTTAGAAATATTAGACATTTCTAATAACAGTTTCTCAAGTACAATACCCTTTGAACTAGAAAATCTCACACTTTTAAATACTTTGAACCTGTCTTTTAACAATCTCTATGGTGATGTTCCCGTAGAAGGTGTCTTTAGCAATGTTTCGGCAATTTCATTAACCGGAAACAAAAACCTTTGTGGAGGAATACTTCAATTGAAACTTCCTCCATGTTCAAAGTTACCCGCCAAAAAACACAAAAGATCACTCAAAAAGAAACTTATCCTTGTCAGTGTAATCGGCGTGGTTTTGATCTCTTTCATAGTTTTTATAATTTTCCATTTTCTTCCAAGAAAGACCAAAATGTTACCTTCTTCACCATCTTTGCAAAAAGGGAATTTGATGATTACTTATAGAGAGCTACATGAAGCAACCGATGGCTTTTCTTCATCCAATTTGGTTGGAACAGGAAGTTTTGGTTCTGTTTACAAAGGATCTCTTCTCAACTTTGAAAAACCCATTGTTGTAAAGGTGTTGAATCTTAAAACACGTGGAGCAGCAAAGAGTTTCAAAGCAGAATGTGAAGCTCTAGGAAAGATGAAGCACCGAAATCTTGTCAAGATCCTAACTTGTTGTTCAAGCATTGATTATAAGGGTGAAGAGTTCAAGGCTATTGTTTTTGAGTTCATGCCTAAGGGAAGTCTAGAAAAGCTTCTGCATGATAACGAAGGGTCTGGAAATCATAATCTCAGCCTCAGACACAGAGTTGACATTGCTCTTGATGTAGCTCATGCACTCGATTATCTTCACAATGGTACAGAGAAATCCATAGTTCACTGTGATATTAAGCCGAGCAACGTTCTTCTGGACGATGACACTGTAGCCCACTTGGGAGACTTTGGCTTAGCTAGGCTCATTCTTGGAACCAGAGACCATTCAAGTAAAGATCAAGTTAATTCTTCCACAATTAAGGGAACTATAGGATATGTTCCTCCTGAATATGGAGCAGGTGTTCCAGTATCTCCACAGGGAGATGTTTACAGCTTTGGGATTCTACTGTTAGAGATGCTCACTGGAAAGAGACCAACAGATAGCATGTTTTGCGAGAATCTTAGCCTTCACAAATTCTGTAAGATGAAAATTCCCGTAGAAATTCTTGAGATAGTGGATTCACATTTGCTTATGCCATTTCTTAAAGATCAGACACTAATGATGGAGTGTCTAGTGATGTTTGCTAAAATAGGAGTTGCATGTTCCGAAGAATTCCCTACTCATCGAATGTTGATAAAAAATGTTACAGTGAAGTTGCTGGAAATTAAGCAGAAGTTGCTCTGCTAG 3024 0.3684 MRTFMSIFFLCFASQILLHYFLSSAITVAFALSSQTDKLALLALKEKLTNGVSDSLPSWNESLHFCEWQGITCGRRHMRVISLHLENQILGGTLGPSLGNLTFLRKLYLSNVDLHGEIPKQVGRLKRLQILHLTNNSKLQGEIPMELTNCSNIKVINLGFNQLIGRIPTRFGSMMQLIRLKLRGNNLVGTIPSSLGNVSSLQNISLTQNHLEGSIPDSLGKLSSLNLLYLGGNNLSGEIPHSLYNLSNMKSFDLGVNNLFGSLPSNMNLVFPNLVEFLVGVNQMTGNFPPSVFNLTELRWFDLGDNFFNGPILLTLGRLIKLEFFQIAKNNFGSGKAHDLDFLFPLTNCTELTELVLHENRFGGELPHFTGNFSTHLSWLDMGMNQIYGAIPKGIGQLTGLTYLDIGNNFLEGTIPNSIGKLNNLVKLFLGENKLYGNIPNSIGNLTMLSELYLNRNKFQGSIPFTLRYCTNLQSLNISDNKLSGHIPNQTISYLENLVDLDLSINSLTGPLPLGFGNLKHISSLYLNENKLSGEIPNDLGACFTLTKLVLKNNFFHGGIPSFLGSLRSLEILDISNNSFSSTIPFELENLTLLNTLNLSFNNLYGDVPVEGVFSNVSAISLTGNKNLCGGILQLKLPPCSKLPAKKHKRSLKKKLILVSVIGVVLISFIVFIIFHFLPRKTKMLPSSPSLQKGNLMITYRELHEATDGFSSSNLVGTGSFGSVYKGSLLNFEKPIVVKVLNLKTRGAAKSFKAECEALGKMKHRNLVKILTCCSSIDYKGEEFKAIVFEFMPKGSLEKLLHDNEGSGNHNLSLRHRVDIALDVAHALDYLHNGTEKSIVHCDIKPSNVLLDDDTVAHLGDFGLARLILGTRDHSSKDQVNSSTIKGTIGYVPPEYGAGVPVSPQGDVYSFGILLLEMLTGKRPTDSMFCENLSLHKFCKMKIPVEILEIVDSHLLMPFLKDQTLMMECLVMFAKIGVACSEEFPTHRMLIKNVTVKLLEIKQKLLC* 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2804 1007 Gene3D Phosphorylase Kinase; domain 1 678 791 - -
Mtr5g2804 1007 Gene3D Ribonuclease Inhibitor 34 193 IPR032675 -
Mtr5g2804 1007 SUPERFAMILY Protein kinase-like (PK-like) 690 996 IPR011009 -
Mtr5g2804 1007 Pfam Protein kinase domain 712 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2804 1007 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Mtr5g2804 1007 SUPERFAMILY L domain-like 345 630 - -
Mtr5g2804 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Mtr5g2804 1007 PANTHER LRR RECEPTOR-LIKE KINASE 35 1007 - -
Mtr5g2804 1007 Pfam Leucine rich repeat 471 532 IPR001611 GO:0005515
Mtr5g2804 1007 Pfam Leucine rich repeat 400 459 IPR001611 GO:0005515
Mtr5g2804 1007 ProSiteProfiles Protein kinase domain profile. 710 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2804 1007 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 35 1007 - -
Mtr5g2804 1007 Gene3D Transferase(Phosphotransferase) domain 1 792 1005 - -
Mtr5g2804 1007 SMART LRR_typ_2 446 470 IPR003591 -
Mtr5g2804 1007 SMART LRR_typ_2 222 246 IPR003591 -
Mtr5g2804 1007 SMART LRR_typ_2 519 543 IPR003591 -
Mtr5g2804 1007 SMART LRR_typ_2 567 588 IPR003591 -
Mtr5g2804 1007 SMART LRR_typ_2 495 518 IPR003591 -
Mtr5g2804 1007 SMART LRR_typ_2 591 616 IPR003591 -
Mtr5g2804 1007 SMART LRR_typ_2 398 422 IPR003591 -
Mtr5g2804 1007 SUPERFAMILY L domain-like 34 332 - -
Mtr5g2804 1007 SMART serkin_6 710 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2804 1007 ProSitePatterns Protein kinases ATP-binding region signature. 716 739 IPR017441 GO:0005524
Mtr5g2804 1007 Gene3D Ribonuclease Inhibitor 197 343 IPR032675 -
Mtr5g2804 1007 Gene3D Ribonuclease Inhibitor 344 641 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2804 Mtr-Chr5 36562914 36566315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2804 31 1004 Receptor kinase-like Gene Family AT3G47570 44.523 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr5g2804 Pkinase 4.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2804 - - mtr:MTR_1g029940 1215.68