Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2793 ATGGAAGAGAGCATGTCAGGCTTTTGCATGAAATCATCTGGAAGTAGTAATTTCCATGGTAAAAGTGGAAGCAGCAGCACTGGCACAAAGTGTGGTCGTTGGAATCCAACAACAGAACAAGTTAAACTTCTGACTGAACTTTTCAGAGCAGGGCTCAGAACTCCAAGCACTGATCAAATTCAGAAAATATCCAATCAACTCAGTTTTTATGGTAAGATAGAGAGCAAGAATGTGTTCTATTGGTTTCAAAATCACAAAGCTAGAGAAAGACAAAAACGTCGTAAGGTTTCTTTTGATGATGACAAGGATGTCATAGTTCATAGAGACAACTCTATGAATGCTTCAACACAAAGGTTTGCTGAGATGTACTCAGAGCCTGATAGAGTGATTGAGACTCTTGAGCTTTTTCCATTGAACTCATTTGGTGAATCAGAATCAGAAAAGTGGAGTATGCATGCAAATGAATGCAGGGAAAATACAATGTTTGCATACACATGTACAATGGGAGAACAAATGGAACACCCACCATTGGACTTACGGTTGAGTTTTGTGTAA 555 0.3892 MEESMSGFCMKSSGSSNFHGKSGSSSTGTKCGRWNPTTEQVKLLTELFRAGLRTPSTDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQKRRKVSFDDDKDVIVHRDNSMNASTQRFAEMYSEPDRVIETLELFPLNSFGESESEKWSMHANECRENTMFAYTCTMGEQMEHPPLDLRLSFV* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2793 184 SMART HOX_1 29 96 IPR001356 GO:0003677
Mtr5g2793 184 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 170 IPR044555 GO:0003700|GO:0099402
Mtr5g2793 184 Gene3D - 30 98 - -
Mtr5g2793 184 PANTHER WUSCHEL-RELATED HOMEOBOX 7 1 170 - -
Mtr5g2793 184 CDD homeodomain 33 93 IPR001356 GO:0003677
Mtr5g2793 184 Pfam Homeodomain 31 91 IPR001356 GO:0003677
Mtr5g2793 184 MobiDBLite consensus disorder prediction 1 33 - -
Mtr5g2793 184 ProSiteProfiles 'Homeobox' domain profile. 27 92 IPR001356 GO:0003677
Mtr5g2793 184 MobiDBLite consensus disorder prediction 8 33 - -
Mtr5g2793 184 SUPERFAMILY Homeodomain-like 6 93 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2793 Mtr-Chr5 36382313 36383419 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2793 27 184 Wox Gene Family AT3G11260 60.714 2.17e-61 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mtr5g2793 Homeodomain 5.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2793 - - cam:101494967 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2793 5 36382313 36383419 Mtr5g2793 5 36382313 36383419 ECH