Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2789 ATGTCGGACGCTTTGATCAATGGATTGGCTGGAGCTGGAGGAGGGATCATTGCTCAACTTATTACATATCCTCTTCAAACTGTGAATACTCGTCAACAAACCGATCGTGATCCGAAGAAGGGCAATAAGAATCTTGGAACTTTTCAACAAATGTGTCAGGTTGTGAAACAAGAGGGATGGGAGAGGTTGTATGGAGGCTTGGCGCCATCACTTGTCGGTACAGCTACATCTCAGGGTGTTTACTATTATTTCTATCAAATATTCAGGAATAGAGCTGAAGCAGCTGCACTAGAGAATATGAGACTAGGCAGTGGTGATGGATCAGTTGGAATGTTCTCCTCACTTATTGTTGCTGCTTTATCCGGCTGTGTTAACGTGCTGTTGACAAATCCGATATGGCTAGTTGTTACTCGTATGCAGACGCATAGAAAAGAGTCGAGGAAAACTCTCCCTGATCCGAGGTTGTCAGGTGCCATTGAACAAACATCACTTTCTACTGTTGAGCCCCTTGCTTATGGAACTAGCCATGTGATTCAAGAAGTTTATGACGAGGCTGGAGTTTTGGGTTTCTGGAAGGGTGTATTACCAACATTGGTCATGGTAAGCAATCCTTCTATACAGTTCATGCTGTATGAAACCTTGTTGGCGAAGTTGAAAAAAAGACGTGCTAGCAGTAGCGTAACTGCTTTAGAGATATTTCTTCTCGGAGCTGTCGCTAAGCTTGGAGCTACAGTTGTAACCTATCCTCTTCTTGTTGTAAAGGCAAGGCTTCAAGCTAGACAAGTTAACAATGGAGACAAGAGACACAATTATAAAGGTACACAGGATGCTATTATTAAGATGATACGCTATGAAGGGTTTAATGGATTTTACAAAGGTATGGGAACCAAAATTGTACAAAGTGTTCTTGCTGCAGCTGTTTTGTTTATGGTGAAAGAAAAACTAGTTGAGCAGACTCGTTCCTTGCTTGCGAAGAATGTTCCCAACACTTTAAAGCCAAAAGTTGTGTGA 1011 0.4214 MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTDRDPKKGNKNLGTFQQMCQVVKQEGWERLYGGLAPSLVGTATSQGVYYYFYQIFRNRAEAAALENMRLGSGDGSVGMFSSLIVAALSGCVNVLLTNPIWLVVTRMQTHRKESRKTLPDPRLSGAIEQTSLSTVEPLAYGTSHVIQEVYDEAGVLGFWKGVLPTLVMVSNPSIQFMLYETLLAKLKKRRASSSVTALEIFLLGAVAKLGATVVTYPLLVVKARLQARQVNNGDKRHNYKGTQDAIIKMIRYEGFNGFYKGMGTKIVQSVLAAAVLFMVKEKLVEQTRSLLAKNVPNTLKPKVV* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2789 336 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 217 IPR018108 -
Mtr5g2789 336 Gene3D Mitochondrial carrier domain 9 326 IPR023395 -
Mtr5g2789 336 SUPERFAMILY Mitochondrial carrier 3 315 IPR023395 -
Mtr5g2789 336 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 1 334 - -
Mtr5g2789 336 Pfam Mitochondrial carrier protein 7 90 IPR018108 -
Mtr5g2789 336 Pfam Mitochondrial carrier protein 109 220 IPR018108 -
Mtr5g2789 336 Pfam Mitochondrial carrier protein 227 316 IPR018108 -
Mtr5g2789 336 ProSiteProfiles Solute carrier (Solcar) repeat profile. 227 318 IPR018108 -
Mtr5g2789 336 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 334 IPR044712 GO:0006862|GO:0055085
Mtr5g2789 336 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2789 Mtr-Chr5 36331683 36338149 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2789 24 329 Chloroplast and Mitochondria Gene Families AT2G47490 27.707 1.05e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2789 K13354 - gmx:100775784 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2789 5 36331683 36338149 Mtr5g2789 5 36331683 36338149 ECH