Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2776 ATGAATCTGTGCTGCTTCCGCCGAACGAAGACTAACAGAGACAGAGGCAGCTTCTTCATCTTCACACCAATCAAAATGGTTAAAGGACGACAAGGAGAACGTATCAGGCTTTATGTCAGGGGTACCGTTCTTGGTTACAAGAGGTCCAAGGTTAATCAATACCCAAACACCTCTCTTGTTCAGATCGAGGGGGTAAACACCAAGGAAGAAGTTGCATGGTATGCTGGGAAGAAATTGGCATACATTTACAAGGCTAAAGTGAAGAAGGATGGTAGCCACTATCGCTGCATTTGGGGTAAGGTTACCAGGCCTCATGGTAACAGTGGTATTGTTCGTGCAAAGTTCAAGTCTAACCTTCCACCAAAATCAATGGGAGCCAGGGTTAGAGTATTTATGTATCCAAGCAATATATAA 414 0.4396 MNLCCFRRTKTNRDRGSFFIFTPIKMVKGRQGERIRLYVRGTVLGYKRSKVNQYPNTSLVQIEGVNTKEEVAWYAGKKLAYIYKAKVKKDGSHYRCIWGKVTRPHGNSGIVRAKFKSNLPPKSMGARVRVFMYPSNI* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2776 137 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 39 131 IPR001780 GO:0003735|GO:0005840|GO:0006412
Mtr5g2776 137 ProSitePatterns Ribosomal protein L35Ae signature. 99 120 IPR018266 GO:0003735|GO:0005840|GO:0006412
Mtr5g2776 137 PANTHER 60S RIBOSOMAL PROTEIN L35A 26 137 IPR001780 GO:0003735|GO:0005840|GO:0006412
Mtr5g2776 137 PANTHER - 26 137 - -
Mtr5g2776 137 SUPERFAMILY Translation proteins 37 131 IPR009000 -
Mtr5g2776 137 Gene3D translation elongation factor selb, chain A, domain 4 31 137 IPR038661 -
Mtr5g2776 137 Pfam Ribosomal protein L35Ae 37 131 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2776 Mtr-Chr5 36205987 36209011 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2776 26 137 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 87.500 4.06e-73 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2776 K02917 - pop:7494468 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2776 5 36205987 36209011 Mtr5g2776 5 36205987 36209011 ECH