Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr5g2770 | ATGCAGGTAAATGAGGACAAGTTTCATGTTGTTGTGGACATAGACAACAATGTATGTCACCGGAGTAATGAACGATGTTCTAACTCCGGTGACCGGTTAAATGAGGATCAAAGGTGTGAGATTGTAGGAGTGTCTGAAAAACAAAGAGGATCTTGTGATTCAGATGGTTCATCTGAATCAGAATGTTCTGTGGAGTTGGATCTGGATGGTGGTGGTGTAGTTTCTGATGTTAAGGTGCATTTGGATAAGGTGGAGAGGGATTGTAGGATTTGTCATCTTAGTATGGATATGACAAACCATGAATCTGGAATTCCTATGGAGCTTGGTTGTTTTTGCAAAAATGATTTGGCTGCTGCTCATAAGCATTGTGCTGAGGCTTGGTTCAAGATTAAAGGCAACAAAACTTGTGAAATCTGTGGATCAATTGCACACAACGTAGCCGGTGCTATTGAAGTTCAAATGACAGAACAGTTCAATGAATCGAGTGATCCCTCCATTGTACCTCCAACTGGACCTTCACCGCCATCAGAAACTCGAAATTTTTGGCAGGGACATCGGTTTTTGAATTTCCTTCTAGCATGTATGGTTTTCGCCTTTGTCATATCATGGCTTTTTCACTTTAATGTTCCCTCTTGA | 636 | 0.4119 | MQVNEDKFHVVVDIDNNVCHRSNERCSNSGDRLNEDQRCEIVGVSEKQRGSCDSDGSSESECSVELDLDGGGVVSDVKVHLDKVERDCRICHLSMDMTNHESGIPMELGCFCKNDLAAAHKHCAEAWFKIKGNKTCEICGSIAHNVAGAIEVQMTEQFNESSDPSIVPPTGPSPPSETRNFWQGHRFLNFLLACMVFAFVISWLFHFNVPS* | 212 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr5g2770 | 211 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 9 | 211 | - | - | |
Mtr5g2770 | 211 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 74 | 148 | IPR013083 | - | |
Mtr5g2770 | 211 | PANTHER | ZINC FINGER, RING-CH-TYPE | 9 | 211 | - | - | |
Mtr5g2770 | 211 | CDD | RING_CH-C4HC3_MARCH | 88 | 140 | - | - | |
Mtr5g2770 | 211 | SMART | ringv_2 | 87 | 140 | IPR011016 | GO:0008270 | |
Mtr5g2770 | 211 | Pfam | RING-variant domain | 88 | 139 | IPR011016 | GO:0008270 | |
Mtr5g2770 | 211 | SUPERFAMILY | RING/U-box | 85 | 142 | - | - | |
Mtr5g2770 | 211 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 80 | 146 | IPR011016 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr5g2770 | Mtr-Chr5 | 36130146 | 36132778 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr5g2770 | 57 | 211 | C3H Transcription Factor Family | AT5G05830 | 64.968 | 5.21e-68 | 205 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr5g2770 | - | - | mtr:MTR_5g081560 | 426.787 |