Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2740 ATGGCTGAAATTTGTTGTGGTGTAGTTGGAGAAGAAGAAACTCTTACTCTACCGGTTGAGCCAAGCTCACGACCTTCCGGTCGACGGAGTTTGGATTTACTACCGTTGAAATACATGGCAGATCCGCCGGAGAATAGCCGGAAACGACAGAAGCTAGATCCATCGGTTTCTCCTCCACCACCTCCAGCTCGAGAGTGCGAAAACGCGGTTGATAGCTGTGAATCAAGTACTGATGAAGAATCAAAGGAAAATGAAGTTGTCTTGGAAAACAAAGTGGTTGTTGTTGAAGAGTGTTCTCCTAAATATGGAATAACATCGGTTTGTGGAAGAAGAAGAGAAATGGAAGACGCTGTTTCTGTTCATCCATCGTTTTGTAGAGAAAAACAAGATCATTTCTTCGGTGTTTACGACGGTCATGGTTGTTCACATGTTGCGACTATGTGTAAAGAAAGGTTGCATGAAATTGTTGAAGAAGAAGTAGAGAAAGAGAAGGTTGACTGGAAATCAACGATGGAGAAGAGTTTTATTAGAATGGATGAAGAAGTGTTGAATTCTAGTAAGACGAAACAGAGCTTCAGTTGTAAGTGTGAGCTTCAAACTCCTCACTGTGATGCTGTTGGTTCTACTGCTGTTGTTGCCGTTGTTACGCCGGAGAAAATCATTGTCTCGAATTGTGGTGATTCACGGGCCGTCCTTTGCCGGAACGGGGTTGCCATTCCTCTTTCCTCCGATCATAAGCCGGATCGACCCGATGAGTTGGATCGGATTAATAAAGCCGGAGGACGTGTGATCTATTGGGATGGTGCAAGAGTGCTTGGAGTGTTGGCCATGTCAAGAGCTATTGGGGACAATTACTTGAAGCCATATGTTATTTCGGAACCGGAGGTAACTATAACGGAAAGGAGTGATGAGGATGAATGTCTGATACTTGCGAGTGATGGCTTATGGGACGTGGTGCAAAATGACACGGCGTGTAAGGTGGTGCAAATGTGTCTCAAGGCGAACAAGACGGTGACGCCGCCTGGGTCTCCGGGACTTGAAGTGGCGGGAAATGGGTCAGATAAGGCGTGCTCCGATGCTTCAATTTTGTTGACGAAGTTGGCATTGGCGAGGAATAGTTCGGACAATGTTAGCGTGGTGGTTGTTGATTTGAGGAGAGATCAACGTCAACAATAA 1176 0.4566 MAEICCGVVGEEETLTLPVEPSSRPSGRRSLDLLPLKYMADPPENSRKRQKLDPSVSPPPPPARECENAVDSCESSTDEESKENEVVLENKVVVVEECSPKYGITSVCGRRREMEDAVSVHPSFCREKQDHFFGVYDGHGCSHVATMCKERLHEIVEEEVEKEKVDWKSTMEKSFIRMDEEVLNSSKTKQSFSCKCELQTPHCDAVGSTAVVAVVTPEKIIVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELDRINKAGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVISEPEVTITERSDEDECLILASDGLWDVVQNDTACKVVQMCLKANKTVTPPGSPGLEVAGNGSDKACSDASILLTKLALARNSSDNVSVVVVDLRRDQRQQ* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2740 391 PANTHER ALPHABET, ISOFORM E-RELATED 37 390 - -
Mtr5g2740 391 CDD PP2Cc 101 335 IPR001932 -
Mtr5g2740 391 SMART PP2C_4 89 382 IPR001932 -
Mtr5g2740 391 Gene3D - 88 391 IPR036457 -
Mtr5g2740 391 ProSitePatterns PPM-type phosphatase domain signature. 132 140 IPR000222 GO:0043169
Mtr5g2740 391 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 37 390 - -
Mtr5g2740 391 ProSiteProfiles PPM-type phosphatase domain profile. 101 384 IPR001932 -
Mtr5g2740 391 SUPERFAMILY PP2C-like 93 385 IPR036457 -
Mtr5g2740 391 MobiDBLite consensus disorder prediction 16 84 - -
Mtr5g2740 391 Pfam Protein phosphatase 2C 101 376 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2740 Mtr-Chr5 35732877 35735101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2740 71 391 PP2C-type Phosphatase Gene Family AT1G07430 60.907 2.27e-146 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2740 K14497 - gmx:100781388 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2084 3 34321636 34323435 Mtr5g2740 5 35732877 35735101 ECH
Mtr5g2740 5 35732877 35735101 Mtr5g2740 5 35732877 35735101 ECH
Mtr3g2084 3 34321636 34323435 Mtr5g2740 5 35732877 35735101 PCT