Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2725 ATGGGAGATGCAATTGATTTGTCTGGGGATGGTGGAGTCATCAAGACCATTGTGAGGAAGAGCAAGTCAGATGCTGTGGCTCCAACAGAAGACTTTCCGGTTGTTGATGTACACTATGAAGGCACACTTGCTGATACCGGTGAAGTCTTTGACACTACACATGAAGACAATACTATATTCTCCTTTGAAGTTGGAAAAGGCAGTGTTATCAAGGCTTGGGACATTGCAGTCAAAACCATGAAGGTTGGAGAAATTGCAAAAATAACATGCAAGCCAGAATATGCATATGGTAGCGCGGGATCTCCGCCAGATATCCCCCCAGACTCAACACTTGTTTTTGAAGTTGAGCTAGTTGCGTGTAGGCCACGTAAGGGCTCCACTACTGGAAGTGTTTCGGAGGAGAGGGCTAGGCTTGATGAGCTGAAGAAGCAGAGAGAGATTGCTGCTGCAGCCAAAGAGGAGGACAAGAAGAAAAGAGAAGAACAAAAAGCGGCAGCTGCAGCTCGCGTGCAAGCGAAACTTGATGCCAAAAAAGGTCATGGAAAGGGTAAAGGGAAAGCAAAGTAG 567 0.4656 MGDAIDLSGDGGVIKTIVRKSKSDAVAPTEDFPVVDVHYEGTLADTGEVFDTTHEDNTIFSFEVGKGSVIKAWDIAVKTMKVGEIAKITCKPEYAYGSAGSPPDIPPDSTLVFEVELVACRPRKGSTTGSVSEERARLDELKKQREIAAAAKEEDKKKREEQKAAAAARVQAKLDAKKGHGKGKGKAK* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2725 188 MobiDBLite consensus disorder prediction 150 188 - -
Mtr5g2725 188 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 32 121 IPR001179 GO:0003755
Mtr5g2725 188 SUPERFAMILY FKBP-like 9 124 - -
Mtr5g2725 188 MobiDBLite consensus disorder prediction 150 166 - -
Mtr5g2725 188 Coils Coil 131 170 - -
Mtr5g2725 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 188 - -
Mtr5g2725 188 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 34 118 IPR001179 GO:0003755
Mtr5g2725 188 Gene3D - 3 120 IPR046357 GO:0003755
Mtr5g2725 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-1 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2725 Mtr-Chr5 35560052 35565444 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2725 6 146 Calmodulin-binding Proteins AT5G48570 32.680 3.63e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2725 K01802 - gmx:100500018 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2725 5 35560052 35565444 Mtr5g2725 5 35560052 35565444 ECH