Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2713 ATGGCAATTGGGATAATGGAAGTACATCTTGTGAAAGCTAAAGGACTCAACAGCACTTGTTTCTTTGGTGGAATGGAAGATCCATATGTTTTGATACAATACCAAGGTCAAGAGCATAGGAGCCGTGTGGCTAAAGGTAGAGGAAGAAATCATGTATGGGATGAGATATTTATGTTCAAAGTAGAAAACAATATTGGATCAAATGATAAAAACAAAGTCATTCTCAAAATAATGGACAAAGATAGCTTTTCTGCTGATGATTTCATTGGACAAGCCACAATATATTGTAAAGATTTATTGGCTCAAGGTGTCCAAAATGGAGTTGCTAAGCTACCACCTCTCAAGTATAGAGTTGTTCGTGCAGACCAATCTTATCGTGGAGAAATTGATGTTTCTATTACTTTTACTCCAAAGGTGGAAGAGGAATTAATTGAAGAAGACATAGGAGGATGGAAAGAAAGTAGTTACTATATATCTTAA 480 0.3563 MAIGIMEVHLVKAKGLNSTCFFGGMEDPYVLIQYQGQEHRSRVAKGRGRNHVWDEIFMFKVENNIGSNDKNKVILKIMDKDSFSADDFIGQATIYCKDLLAQGVQNGVAKLPPLKYRVVRADQSYRGEIDVSITFTPKVEEELIEEDIGGWKESSYYIS* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2713 159 PANTHER C2 DOMAIN-CONTAINING 1 155 - -
Mtr5g2713 159 PANTHER ELICITOR-RESPONSIVE PROTEIN 1 1 155 - -
Mtr5g2713 159 Pfam C2 domain 4 107 IPR000008 -
Mtr5g2713 159 SMART C2_3c 5 108 IPR000008 -
Mtr5g2713 159 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 140 IPR035892 -
Mtr5g2713 159 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Mtr5g2713 159 Gene3D C2 domain 2 138 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2713 Mtr-Chr5 35373029 35374286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2713 3 107 C2H2 Transcription Factor Family AT4G21160 35.238 4.56e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2713 - - pvu:PHAVU_008G232700g 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2713 5 35373029 35374286 Mtr5g2713 5 35373029 35374286 ECH