Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2712 ATGACAATTGGGTTCATGGAAGTGCTTTTGGTGAAAGCAAAGGGTCTTCAAGAGACTGATATCTTTGCTCGCATGGATCCATATGTTCTGTTACAATACAAAAGGCAAGAGCACAAGAGCAGTGTTGTTCATGAGGGGGGTAGCAGTCCTGTATGGAATGAGAAATTCGTATTCAGAGTGGAATACCCTGGATCAGGAGACCAATACAAGCTCAATCTTAAAATCATGGACAAGGATGTTTTTTCTTCCGATGATTTTGTTGGTCAGGCCGTAATCTATGTAAAGGATCTATTGGCGGAAGGAGCAGAGAATGGATCAGCTGAGCTTCGTCCTCGCAAGTATAGTGTGGTTCGAGCCGACAATTCTTATTGCGGTGAACTCGAAGTTGGTATAACTTACACTCGAAAGGAAAATGAATATACTGACGATGACATTGGAGGATGGAGGGATAGTGAATATTAG 462 0.4242 MTIGFMEVLLVKAKGLQETDIFARMDPYVLLQYKRQEHKSSVVHEGGSSPVWNEKFVFRVEYPGSGDQYKLNLKIMDKDVFSSDDFVGQAVIYVKDLLAEGAENGSAELRPRKYSVVRADNSYCGELEVGITYTRKENEYTDDDIGGWRDSEY* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2712 153 PANTHER C2 DOMAIN-CONTAINING 1 152 - -
Mtr5g2712 153 CDD C2_putative_Elicitor-responsive_gene 4 127 - -
Mtr5g2712 153 SMART C2_3c 5 106 IPR000008 -
Mtr5g2712 153 Pfam C2 domain 7 105 IPR000008 -
Mtr5g2712 153 Gene3D C2 domain 3 135 IPR035892 -
Mtr5g2712 153 PANTHER ELICITOR-RESPONSIVE PROTEIN 1 1 152 - -
Mtr5g2712 153 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 137 IPR035892 -
Mtr5g2712 153 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2712 Mtr-Chr5 35362336 35365817 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2712 3 145 C2H2 Transcription Factor Family AT4G21160 26.573 2.26e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2712 - - gmx:100500493 273.478