Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2709 ATGGGTTGTTGCCTCAGTGCTAGAATCAAAGCTGAAAGCCCTCCACGTAATGGCTCGAGTTCGAAGGACAGAAGCAGAGAAACTGGCTTGAGTGGTCGAAGCAGTGGCAAGGTCTCCACTGCACCTACTGCACCTCCAACTCCTCGAACTGAGGGCGAGATCTTGAAGTCTTCCAATATGAAGAGCTTCACTTTTAGTGAGCTAAAAACTGCTACAAGAAACTTTCGTCCCGACAGTGTGGTTGGCGAAGGTGGATTCGGAGCTGTATTTAAGGGGTGGATCGATGAGAACACACTAGTACCGGTTAGACCAGGGACTGGAGTTGTCATTGCTGTCAAGAGGCTTAACCAAGAAGGTTTACAAGGACACAGTGAGTGGTTGACAGAAATCAATTACCTGGGACAGCTGCATCATCCTAATCTTGTGAAACTGATCGGTTACTGCTTCGAAGATGAACATCGGCTTTTGGTTTATGAGTTTTTGACCAAAGGCAGTCTGGATAATCACTTATTCAGGAGAGCTTCTTATTTTCAACCACTTTCTTGGAGCATCCGAATGAAGGTTGCTCTTGATGCTGCTAAGGGTCTTGCATATCTTCACAGCGATGAAGCAAAAGTGATATATCGTGACTTTAAAACTTCAAATATATTGCTCGACACAAATTATAATGCAAAACTTTCCGATTTTGGATTGGCTAAGGATGGACCGGCAGGTGATAATAGTCATGTCTCTACAAGGGTTATGGGCACATACGGCTATGCTGCTCCTGAATATATGGCCACAGGTCATTTGACCAAAAAGAGTGATGTATACAGTTTCGGCGTTGTGCTCCTTGAAATTATGTCTGGAAAACGCGCACTCGACAACAACAGGCCATCTGGGGAACACAATTTAATTGAATGGGCCAAACCATACCTCAACAGCAAACGTCGGGTTTTCCAAGTTATGGATGCTCGCATTGAAGGCCAATACACAGTGCGTCAAGCAATGAAAGTAGCTGACCTTGCAGTCCGATGCCTGTCCGTTGAACCAAGATTCAGACCGAAAATGGACGAGATTGTAAGAGTATTGGAGGAACTTCAGAGTTCTTCAGTTGACACGGCCGGAGGAGTCGGAAGTTCTCGAGATCAAAACATTAAAAGGAGTGTTCATGACATTAAAAGGAGTGTTCATGTCTCAAGGAACAGTAACGGTCCTAGACAACATAGAAGTAATAGGCCAAGTGTAACAATAAACAATGAATTATTAGTTATGTAG 1257 0.4415 MGCCLSARIKAESPPRNGSSSKDRSRETGLSGRSSGKVSTAPTAPPTPRTEGEILKSSNMKSFTFSELKTATRNFRPDSVVGEGGFGAVFKGWIDENTLVPVRPGTGVVIAVKRLNQEGLQGHSEWLTEINYLGQLHHPNLVKLIGYCFEDEHRLLVYEFLTKGSLDNHLFRRASYFQPLSWSIRMKVALDAAKGLAYLHSDEAKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPAGDNSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYSFGVVLLEIMSGKRALDNNRPSGEHNLIEWAKPYLNSKRRVFQVMDARIEGQYTVRQAMKVADLAVRCLSVEPRFRPKMDEIVRVLEELQSSSVDTAGGVGSSRDQNIKRSVHDIKRSVHVSRNSNGPRQHRSNRPSVTINNELLVM* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2709 418 MobiDBLite consensus disorder prediction 31 56 - -
Mtr5g2709 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Mtr5g2709 418 Gene3D Phosphorylase Kinase; domain 1 50 160 - -
Mtr5g2709 418 ProSitePatterns Protein kinases ATP-binding region signature. 81 113 IPR017441 GO:0005524
Mtr5g2709 418 MobiDBLite consensus disorder prediction 365 412 - -
Mtr5g2709 418 PANTHER OS01G0588500 PROTEIN-RELATED 29 410 - -
Mtr5g2709 418 CDD STKc_IRAK 81 360 - -
Mtr5g2709 418 Gene3D Transferase(Phosphotransferase) domain 1 161 379 - -
Mtr5g2709 418 MobiDBLite consensus disorder prediction 1 56 - -
Mtr5g2709 418 PANTHER KINASE 1B 29 410 - -
Mtr5g2709 418 Pfam Protein tyrosine and serine/threonine kinase 79 357 IPR001245 GO:0004672|GO:0006468
Mtr5g2709 418 ProSiteProfiles Protein kinase domain profile. 75 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2709 418 SUPERFAMILY Protein kinase-like (PK-like) 50 357 IPR011009 -
Mtr5g2709 418 MobiDBLite consensus disorder prediction 392 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2709 Mtr-Chr5 35345702 35348661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2709 15 357 Glycoside Hydrolase AT3G07070 45.915 1.95e-105 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr5g2709 PK_Tyr_Ser-Thr 4.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2709 - - gmx:100775335 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2709 5 35345702 35348661 Mtr5g2709 5 35345702 35348661 ECH
Mtr3g2051 3 33893760 33898848 Mtr5g2709 5 35345702 35348661 PCT