Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2704 ATGTCTTTCAATTTCAATAAGAGAAGCCTCGTCAAAACCCTTTTCTCCTCTAACAAAAGCTGTGGTTGCATCAAAATAAAACCCTCTAACGTACTTGAACCCTCTCAAAAACCTAAAATCTCCTTTAACCAAAACACAAACCCTAATACCCTCACTTCTCCCACCACTTCCCACGACGCCAACACCCATGACAAAGATTTCACTTCCACCACCATCTCAAACGACAACAATAATAATTATAGGATTTTAAAGCCGGCTACAAAACTCATAGATAGCATTGCCGTTGAGAAGGAATCCAAGGAGCCGTATGAAGATTTTCGAAACTCTATACTTCAAATGATATTGGAGAGAGAGATTTATTCAGAAAATGATCTTCAAGAATTACTTGAGTGTTTTCTTCAGCTTAATGCAAAGTGTCACCATCATGTCATTGTTGAAGCGTTCATGGAGACATGTGAAGAAATATTTCCTAAGAAGCTTTGTGGTGATGGTAGACGTGTGTGA 504 0.3849 MSFNFNKRSLVKTLFSSNKSCGCIKIKPSNVLEPSQKPKISFNQNTNPNTLTSPTTSHDANTHDKDFTSTTISNDNNNNYRILKPATKLIDSIAVEKESKEPYEDFRNSILQMILEREIYSENDLQELLECFLQLNAKCHHHVIVEAFMETCEEIFPKKLCGDGRRV* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2704 167 MobiDBLite consensus disorder prediction 34 71 - -
Mtr5g2704 167 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 93 153 IPR006458 -
Mtr5g2704 167 Pfam Transcriptional repressor, ovate 99 156 IPR006458 -
Mtr5g2704 167 ProSiteProfiles OVATE domain profile. 95 154 IPR006458 -
Mtr5g2704 167 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 4 165 - -
Mtr5g2704 167 MobiDBLite consensus disorder prediction 34 58 - -
Mtr5g2704 167 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 4 165 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2704 Mtr-Chr5 35282070 35282573 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mtr5g2704 Ovate 2.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2704 - - mtr:MTR_5g079710 320.472