Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2699 ATGCAACTTTGTTGTTCATCAAACAATGCTATCACCTTGATACAAAAGGTGATTGCAGAAATCATTGGGACATATTTTGTGGTGTTTGCTGGATGTGGGTCTGTAGCAGTGGACAAGATCTATGGGTCTGTCACATTTCCAGGGGTATGTATCACTTGGGGGCTTATTGTAATGGTCATGTCTTACTCTGTTGGTCATATCTCTGGAGGACATTTCAACCCTGCTGTTACCATCACATGGACCATCTTTCGTAGGACCTCACTTAAAGAGGCTCCACTATACATTTTTGCTCAGTTGGTAGGATCAACGCTTGCGAGTGGAACATTATCACTAATGTTCGATGTCACGTCCAAAACTTATTTTGGAACCGTACCAGTTGGATCAAATGGCCAGTCTTTAGTTGTAGAAATCATCATCAGTTTTCTCTTAATGTTTGTCATTTCAGCGGTTTCAACCGACGAAAGAGCGGTGAATGATTTCGCAGGTGTTGCAGTTGGAATGACTATAATGTTGAATGTCTTCATTGCTGGGCCTGTATCAGGAGGATCTATGAACCCAGCAAGAAGTATTGGTCCTGCACTTATAGTACATGTTTACAAAGGACTATGGATATATGTGGTTGGTCCAATTGTTGGAGCTATAGCTGGAGCAATTGCATATAACTTTCTTAGATCCATAAAGTCACCTTCAGAGTTAGCAGATGAACAATTCAGGAACATTGTTGTAGGTTGA 732 0.4112 MQLCCSSNNAITLIQKVIAEIIGTYFVVFAGCGSVAVDKIYGSVTFPGVCITWGLIVMVMSYSVGHISGGHFNPAVTITWTIFRRTSLKEAPLYIFAQLVGSTLASGTLSLMFDVTSKTYFGTVPVGSNGQSLVVEIIISFLLMFVISAVSTDERAVNDFAGVAVGMTIMLNVFIAGPVSGGSMNPARSIGPALIVHVYKGLWIYVVGPIVGAIAGAIAYNFLRSIKSPSELADEQFRNIVVG* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2699 243 TIGRFAM MIP: MIP family channel proteins 19 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr5g2699 243 ProSitePatterns MIP family signature. 71 79 IPR022357 -
Mtr5g2699 243 PANTHER AQUAPORIN NIP4-1-RELATED 3 228 - -
Mtr5g2699 243 Gene3D Glycerol uptake facilitator protein. 2 236 IPR023271 -
Mtr5g2699 243 PRINTS Major intrinsic protein family signature 15 34 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr5g2699 243 PRINTS Major intrinsic protein family signature 53 77 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr5g2699 243 PRINTS Major intrinsic protein family signature 90 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr5g2699 243 PRINTS Major intrinsic protein family signature 135 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr5g2699 243 PRINTS Major intrinsic protein family signature 166 188 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr5g2699 243 PRINTS Major intrinsic protein family signature 203 223 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr5g2699 243 SUPERFAMILY Aquaporin-like 12 231 IPR023271 -
Mtr5g2699 243 Pfam Major intrinsic protein 11 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr5g2699 243 PANTHER AQUAPORIN NIP2-1 3 228 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2699 Mtr-Chr5 35215370 35217341 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2699 5 229 Major Intrinsic Protein MIP AT5G37820 64.159 5.87e-105 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2699 K09874 - gmx:100791338 362.073