Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2698 ATGGAAACATCAGAGAATTCTCCTCCAACGTTGGAGGACCAAAATACATCGGTGTCCGTACGGAGAGCCTTGGAGCTACTCCATCTGGACAACCAGGACATGAAAATTCAGGCTGCCAAGGACATCCGCCATCTCACCAAAACATCCCACCGTTGCCGCCGTCAGCTCCAACAAGCTATCACCCCACTTGTTTCCATGCTCCGAGTCGACTTGCCGGAATCCCATGAACCTGCTCTTTTGGCCTTGCTTAACCTCGCTGTTCAAGATGAAAAGAACAAAATCAACATTGTGGAAGCTGGTGCATTAGAACCAATAGTTAATTTTCTCAAGTCACAAAATCAAAATCTACAAGAGTATGCAACTGCATCATTGCTCACTCTATCTGCATCAACAACCAACAAACCAATCATCACTTCTTATGAAACAATTCCTCTTCTTGTTAACATTCTTAGAAATGGAAGCCAACAAGCTAAATCTGATGCTGTAATGGCTCTATCCAATTTATCAACACACCATGATAACCTCAACACTATACTAGAATCAAATCCAATTCCTTTTATAATTAACATTCTCAAAACATGTAAAAAGTCCTCAAAAACAGCTGAAAAATGCTGCAGTTTGATAGAGTCGTTGGTCGATTATGAAGAAGGAATAGTTTCATTAACATCGGAAGAAGGCGGTGTTCTTGCAGTAGTTGAAGTTCTTGAAAATGGAAATCCACAAAGTAAAGAACATGCTGTTGGAACATTGTTGAGAATGTGTCAAAGTGATAGGTGTAAATATAGGGAACCAATTTTAAGCGAAGGTGTAATTCCAGGACTTCTTGAACTAACTGTTCAAGGAACAACAAAGTCTAAGGCAAAATCATGTACACTTTTGCAGCTACTAAGAGATTCTGATGTTGAAACAAGATGTGAAATTGAAGGTGAGACTCTTGAGAACATAGTGTATGATATTATATCTCAGATTGATGGTGATGAACAATTTGGTAAAGCAAAGAAAATGTTAGATGAAATGGTTCAAGTTAGTATGGAACAAAGTTTGAGACATTTACAACAAAGGGCTCTAGTTTCTACCACAAGTGATGTGTCTATTACTAGTTGTGCTTCTGAAGTTTCTTCCAAATGA 1128 0.3874 METSENSPPTLEDQNTSVSVRRALELLHLDNQDMKIQAAKDIRHLTKTSHRCRRQLQQAITPLVSMLRVDLPESHEPALLALLNLAVQDEKNKINIVEAGALEPIVNFLKSQNQNLQEYATASLLTLSASTTNKPIITSYETIPLLVNILRNGSQQAKSDAVMALSNLSTHHDNLNTILESNPIPFIINILKTCKKSSKTAEKCCSLIESLVDYEEGIVSLTSEEGGVLAVVEVLENGNPQSKEHAVGTLLRMCQSDRCKYREPILSEGVIPGLLELTVQGTTKSKAKSCTLLQLLRDSDVETRCEIEGETLENIVYDIISQIDGDEQFGKAKKMLDEMVQVSMEQSLRHLQQRALVSTTSDVSITSCASEVSSK* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2698 375 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 6 355 - -
Mtr5g2698 375 SUPERFAMILY ARM repeat 11 308 IPR016024 -
Mtr5g2698 375 PANTHER U BOX DOMAIN-CONTAINING 6 355 - -
Mtr5g2698 375 Gene3D - 12 363 IPR011989 -
Mtr5g2698 375 SMART arm_5 214 255 IPR000225 GO:0005515
Mtr5g2698 375 SMART arm_5 130 170 IPR000225 GO:0005515
Mtr5g2698 375 SMART arm_5 171 213 IPR000225 GO:0005515
Mtr5g2698 375 SMART arm_5 89 129 IPR000225 GO:0005515
Mtr5g2698 375 SMART arm_5 48 87 IPR000225 GO:0005515
Mtr5g2698 375 Pfam Armadillo/beta-catenin-like repeat 90 128 IPR000225 GO:0005515
Mtr5g2698 375 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 100 137 IPR000225 GO:0005515
Mtr5g2698 375 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 141 183 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2698 Mtr-Chr5 35209070 35212562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2698 2 298 U-box Gene Family AT3G54790 34.768 1.45e-35 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2698 - - gmx:100780954 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2038 3 33778014 33782062 Mtr5g2698 5 35209070 35212562 PCT