Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2697 ATGAACATAGCGAAAGCCTTGAAGAAAGTCTCGAAGAACATCCAAAACAAACTAAGTCTGAACCCACAAGTTGATCATGACCCTCCCCACTCAGTTGTCCATGACCACCCTCGCCATTTTCTTGAACATACGCCTCCCAATGAAGCAAGATCAAGTGTTGTACCAACTGCACGTCATGTCGGTGAAGCAAGTTCGAGTGTTGTACCACCTCAAAATGATGGTGATTGCTTATTTAAACCAGTGGTCTTTTCCTTAAGTAAAAAGAGTGCAGCAGGAGGAACTGGATCAGAATTTCACTCGGAACTTGAGGCTTCAAAATTAGTCCGTCACCATAATCTACTTTCTCTTGTTGGTTACTGCTTGGGAGAGGGAGAGAAGATTCTGGTGTATGAGTATATGCCTAATGGGACTCTAAGTCAGCATCTTTTTGATTGGGAGGTCGAAGGACTCCAATCACTCACATGGAATCAGAGAATGATCATTGCCTTGGATATTGCAAAAGGTTTGGAGTACCTTCATGGTAGTTTAACTAAGAGTACTATCGTCCACGGAGACTTGAAGCCTTCTAACATTCTTCTCGGAGAAAATATGAGGGCAAAGATCGCAGATTTCGGCCTAGGCTGTTTTATTCCACACAACAAATCCTCCATCCGAACAGGAAACGCACGAGGAACATTTGGATATATCGCGCCAGAATACGCAGGTTCTGGCACCGTGGCACCTCCAGGTGACGTGTACAGCTTCGGCGTCATGTTGATGGAACTGATGACAGGAAGTAAAGCAGTGGATGACAGCAGGGGTGAGGATAGGCGGAGTATTGTAACATGGTTCCAAGAAATGCGCAAGGATGAAAACTTGTTAATAAGTGCGGTTGACGAAACAATTGATACCACCGAAGAAGATACGCTAGCTACTATTGGCATTATAAGAAAGTTAGCTTTTAAATGCACTGAAAGGAGTTCAGGTCGCAGGCCTGACATGTCTCGTGTGGTTAGTGTGCTTTATCCTCTTGTAGAAAATTAG 1023 0.4418 MNIAKALKKVSKNIQNKLSLNPQVDHDPPHSVVHDHPRHFLEHTPPNEARSSVVPTARHVGEASSSVVPPQNDGDCLFKPVVFSLSKKSAAGGTGSEFHSELEASKLVRHHNLLSLVGYCLGEGEKILVYEYMPNGTLSQHLFDWEVEGLQSLTWNQRMIIALDIAKGLEYLHGSLTKSTIVHGDLKPSNILLGENMRAKIADFGLGCFIPHNKSSIRTGNARGTFGYIAPEYAGSGTVAPPGDVYSFGVMLMELMTGSKAVDDSRGEDRRSIVTWFQEMRKDENLLISAVDETIDTTEEDTLATIGIIRKLAFKCTERSSGRRPDMSRVVSVLYPLVEN* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2697 340 SMART serkin_6 51 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2697 340 Gene3D Transferase(Phosphotransferase) domain 1 134 340 - -
Mtr5g2697 340 SUPERFAMILY Protein kinase-like (PK-like) 95 336 IPR011009 -
Mtr5g2697 340 PANTHER OSJNBA0070M12.3 PROTEIN 32 70 - -
Mtr5g2697 340 PANTHER OSJNBA0070M12.3 PROTEIN 96 340 - -
Mtr5g2697 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Mtr5g2697 340 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 96 340 - -
Mtr5g2697 340 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 32 70 - -
Mtr5g2697 340 Pfam Protein tyrosine and serine/threonine kinase 87 333 IPR001245 GO:0004672|GO:0006468
Mtr5g2697 340 ProSiteProfiles Protein kinase domain profile. 54 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2697 340 Gene3D Phosphorylase Kinase; domain 1 79 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2697 Mtr-Chr5 35203792 35205080 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2697 97 340 Receptor kinase-like Gene Family AT5G45780 38.934 8.16e-47 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mtr5g2697 PK_Tyr_Ser-Thr 1.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2697 - K00924 mtr:MTR_5g079540 665.225