Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2691 ATGTATATGTATCGGTGCTCTAAATATATGTACATGAGGGCAACTGATCATACAATGTCTATGGACAATAAAGGAAAGTTAAATATGGAGATGACCAGAGGCGTGAGAAAAGGTGCATGGACATATGAGGAAGACAAGCTACTCAAGGCTTGTATACAGAAGTATGGTGAAGGAAAATGGCATTTAGTTCCACAAAGAGCAGGATTGAATAGGTGCCGAAAAAGCTGTAGATTGAGGTGGTTAAATTATTTAACCCCCAACATCAAAAGGGAAAGCTTTGCTGAGGATGAAGTTGATATGATGCTAAGGTTACACAAACTTCTAGGGAATAGATGGTCATTGATTGCTGCAAGGCTTCCGGGTAGAACAGCTAATGATGTGAAGAATTATTGGCACACACATTTGAGAAAGAAGATGGTTTCAAGAACACTAGAAGAAAAGAAAGAAAAACCTAAGGAAACCATGAAAGTTCATGAAATTATTAAACCTAAACCTCGAACTTTCTCAACTCATCCACCTTCGTTGAACTGGAAACATAATATTAATGTGACACCAATTGTGGCGGTTTCAACTCAACACGGTGAAGTCTCGCCAAATCGTGATAATAAAGAGATTACGGATTCAAACCAAATTGGTAGAGATATTGTTGGTGTTTCCCAACCAAGTCTTGGTAGTGCTCCAATACCGTGTGCAATGTTGTGGGACAGTTTATTGAACTTGGAGGAGCATAAAAGTAGTGAGAAAATTGGGTCAGGCTCTTTATTACAAGAGGAGAACTTCATTTCTGAGTTTCCAAATGTGGATGACTCCTTTTGGGATTTCAACCTTTGTGATTTCGATTCTCTTTGA 849 0.3863 MYMYRCSKYMYMRATDHTMSMDNKGKLNMEMTRGVRKGAWTYEEDKLLKACIQKYGEGKWHLVPQRAGLNRCRKSCRLRWLNYLTPNIKRESFAEDEVDMMLRLHKLLGNRWSLIAARLPGRTANDVKNYWHTHLRKKMVSRTLEEKKEKPKETMKVHEIIKPKPRTFSTHPPSLNWKHNINVTPIVAVSTQHGEVSPNRDNKEITDSNQIGRDIVGVSQPSLGSAPIPCAMLWDSLLNLEEHKSSEKIGSGSLLQEENFISEFPNVDDSFWDFNLCDFDSL* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2691 282 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 33 192 - -
Mtr5g2691 282 ProSiteProfiles Myb-like domain profile. 85 135 IPR001005 -
Mtr5g2691 282 ProSiteProfiles Myb-like domain profile. 32 84 IPR001005 -
Mtr5g2691 282 Gene3D - 37 89 - -
Mtr5g2691 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 84 IPR017930 -
Mtr5g2691 282 CDD SANT 95 135 IPR001005 -
Mtr5g2691 282 CDD SANT 39 84 IPR001005 -
Mtr5g2691 282 PANTHER TRANSCRIPTION FACTOR MYB113-RELATED 33 192 - -
Mtr5g2691 282 Gene3D - 91 162 - -
Mtr5g2691 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 139 IPR017930 -
Mtr5g2691 282 SMART sant 89 137 IPR001005 -
Mtr5g2691 282 SMART sant 36 86 IPR001005 -
Mtr5g2691 282 SUPERFAMILY Homeodomain-like 34 131 IPR009057 -
Mtr5g2691 282 Pfam Myb-like DNA-binding domain 37 84 IPR001005 -
Mtr5g2691 282 Pfam Myb-like DNA-binding domain 90 135 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2691 Mtr-Chr5 35100886 35102782 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2691 30 193 MYB Transcription Factor Family AT1G66370 58.235 1.95e-63 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr5g2691 Myb_DNA-binding 3.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2691 - K09422 mtr:MTR_7g017260 323.553