Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2663 ATGGGAAGGCAACCTTGTTGTGACAAAGTAGGATTGAAAAAAGGGCCATGGACTGCAGAAGAAGACAGGAAGCTCATCAATTTCATCCTTACTAATGGTCAATGTTGCTGGAGAGCTGTCCCTAAATTGGCAGGGCTATTAAGGTGTGGAAAAAGTTGTAGACTTAGATGGACAAATTACTTGAGGCCAGATTTAAAAAGAGGACTTTTATCTGAATATGAAGAGAAAATGGTGATTGATCTTCATGCTCAACTTGGGAACAGATGGTCTAAGATTGCTTCTCATTTACCTGGAAGAACGGATAATGAAATAAAAAATCATTGGAATACTCACATAAAGAAAAAGCTCAAGAAAATGGGAATTGATCCTATGACACACAAACCACTAGCACTCTCTAATGCAAGTGATCAAACCCAAGATCAACCTAAACAACAACTACACCAATCATTAGAAAAAGAACAGGAAAACCAACAACCTTTGACAATTGACATTGACAACAAAATTGAATCAAAAGTTGAGGAGCATAATAAGGAGGTTGAGAAGCCAAAGACGTCTTTTGAGTCACCAACCATAATTGAAATCAAAGAGAAAGATGAAATTACAATAACACCCTTATTTGACACAATGGATGGATTTTCTATAGATGAAGTTCCAATGATAGAACCTAATGAGATTATAGTGTCTAATTCCTCTTCATCCACTTCTTCATCAAATTCAACCAATTTCCTTGAAGATCTTCATCTCCTTGATTTTGAATGGCCTAATAATAATAACAAGGAAGAATGCAATAACAACAATATGGCCTTTTGGGATGATGACTTTATTAGTAGCTTGAATTTGTTGCTTAATGATGATGACATTGATGTTAATAATGGTGAAAGAAAGCAAGAACTTGATGCTCCTCTTAGCAATTACTCAAGAATGGCCATGGATTTAGAATCTTGGGCACATGAATTGTTTTGA 963 0.3562 MGRQPCCDKVGLKKGPWTAEEDRKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPMTHKPLALSNASDQTQDQPKQQLHQSLEKEQENQQPLTIDIDNKIESKVEEHNKEVEKPKTSFESPTIIEIKEKDEITITPLFDTMDGFSIDEVPMIEPNEIIVSNSSSSTSSSNSTNFLEDLHLLDFEWPNNNNKEECNNNNMAFWDDDFISSLNLLLNDDDIDVNNGERKQELDAPLSNYSRMAMDLESWAHELF* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2663 320 CDD SANT 16 61 IPR001005 -
Mtr5g2663 320 SMART sant 13 63 IPR001005 -
Mtr5g2663 320 SMART sant 66 114 IPR001005 -
Mtr5g2663 320 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mtr5g2663 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mtr5g2663 320 MobiDBLite consensus disorder prediction 126 159 - -
Mtr5g2663 320 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Mtr5g2663 320 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mtr5g2663 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mtr5g2663 320 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mtr5g2663 320 CDD SANT 74 112 IPR001005 -
Mtr5g2663 320 Gene3D - 71 116 - -
Mtr5g2663 320 Gene3D - 11 67 - -
Mtr5g2663 320 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mtr5g2663 320 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 271 - -
Mtr5g2663 320 PANTHER MYB TRANSCRIPTION FACTOR 1 271 - -
Mtr5g2663 320 MobiDBLite consensus disorder prediction 130 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2663 Mtr-Chr5 34679903 34682525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2663 1 285 MYB Transcription Factor Family AT1G66230 56.803 4.83e-102 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr5g2663 Myb_DNA-binding 3.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2663 K09422 - gmx:100803624 417.157