Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2660 ATGAAGCTGAAAAAAACCGTTCTGCTTTATTTCACAGCATGTCTAATAATCACCATTGTTTCCGGCGCCGATCTAGCTTCCGACAGAGCCAGTTTATTAACACTCCGCGCCACGGTGGGTGGACGTACTCTTCTATGGAATTCAACAGAAACAAACCCATGTCTATGGACCGGAGTTATCTGCAATAACAAAAGAGTTACAGCGTTGAGGTTACCGGCGATGGGTCTCTCCGGTAACCTTCCTTCAGGTATAGGTAATCTCACTGAATTGCAGACGCTTTCTCTCCGGTATAACGCGTTAACAGGACCAATTCCCATGGATTTTGCAAAACTGGTTTCACTTAGGAATCTTTATCTTCATAGTAACTTTTTCTCCGGTGAGGTGCCGGAGTTTTTATATGGTTTGCAGAATTTGGTGAGGTTGAATTTAGGTAAAAACAATTTCAGCGGTGAAATTTCTCAACATTTTAATAATCTTACTCGTTTGGATACATTGTTTTTGGAACAGAACATGTTTACTGGTTCTGTTCCTGATCTTAATATTCCTCCTTTGCATCAGTTCAATGTGTCGTTTAATAATTTAACCGGGCAAATTCCGAAGAGGTTTTCGCGTTTAAATATAAGTGCTTTTTCTGGTAATTCGCTTTGTGGGAATCCTCTTCAAGTAGCTTGTCCTGGAAACAATGACAAAAATGGTTTATCTGGTGGAGCTATTGCTGGTATTGTGATTGGTTGTGTTTTTGGTTTGGTGTTGATTCTTGTTCTTTTGGTGCTGTGTTGTAGAAAAAGAAAAAAAAGTGATTCTGATAATGTAGCACGTGCTAAGAGTGTTGAAGGTGAGGTGTCACGTGAGAAAACTAGAGATTTTGAGAGTGGTGGTGGTGCTGGTGGGAGTTATTCAGGTATAGCATCGACTTCAACGATGGCTTCAGCTTCGGTTTCAGCTTCTGGCGTGTCATTAGAGAAGAGTTTGATATTTATTGGGAATGTGAGTAGAAAGTTTAGTTTGGATGATTTGTTAAAAGCTTCAGCTGAAGTTTTGGGGAAAGGGACATTTGGAACAACTTATAAGGCAACATTGGAGATGGGAATTAGTGTGGCTGTAAAGAGATTGAAGGATGTTACAGCAAGTGAAAGAGAATTCAGGGAGAAAATTGAGGAGGTTGGGAAATTGGTTCATGAGAAATTGGTCCCACTTAGGGGTTATTATTTTAGTAAAGATGAGAAGCTTGTTGTGTATGATTATATGCCAATGGGAAGCTTATCTGCACTCTTGCATGCAAATAATGGAGCTGGAAGGACTCCATTGAATTGGGAAACTAGGTCCACCATCGCCCTTGGTGCTGCTCAAGGGATTGCATACCTACACTCACAAAGTCCAACATCTTCCCATGGAAACATCAAGTCATCAAACATCCTTCTCACCAAATCATTTGAACCTCGCGTCTCAGATTTCGGGCTCGCTTACCTGGCTCTTCCAACCGCTACACCCAACCGAGTTTCCGGTTACCGTGCACCAGAGGTCACCGACGCACGCAAAGTATCCCAAAAAGCAGACGTCTATAGCTTTGGTATAATGCTTTTGGAGCTTCTTACCGGGAAGGCGCCTACCCATTCTTCACTGAATGAAGAAGGAGTAGACCTACCAAGATGGGTCCAGTCCATTGTTCAAGACGAGTGGAACACCGAGGTTTTCGACATGGAGCTTCTCAGGTACCAAAGCGTTGAGGAGGAAATGGTGAATCTTTTGCAGCTTGCGCTTGAATGCACCACTCAATATCCTGATAAGAGACCTTCAATGGATGTGGTTGCAAGCAAGATTGAGAAAATTTGTCATCCAAGCTTAGAGAAAGAGGAAGAGAAGATTCATGATGATTTGTCTAAAGATGAAGATAATTGA 1899 0.4202 MKLKKTVLLYFTACLIITIVSGADLASDRASLLTLRATVGGRTLLWNSTETNPCLWTGVICNNKRVTALRLPAMGLSGNLPSGIGNLTELQTLSLRYNALTGPIPMDFAKLVSLRNLYLHSNFFSGEVPEFLYGLQNLVRLNLGKNNFSGEISQHFNNLTRLDTLFLEQNMFTGSVPDLNIPPLHQFNVSFNNLTGQIPKRFSRLNISAFSGNSLCGNPLQVACPGNNDKNGLSGGAIAGIVIGCVFGLVLILVLLVLCCRKRKKSDSDNVARAKSVEGEVSREKTRDFESGGGAGGSYSGIASTSTMASASVSASGVSLEKSLIFIGNVSRKFSLDDLLKASAEVLGKGTFGTTYKATLEMGISVAVKRLKDVTASEREFREKIEEVGKLVHEKLVPLRGYYFSKDEKLVVYDYMPMGSLSALLHANNGAGRTPLNWETRSTIALGAAQGIAYLHSQSPTSSHGNIKSSNILLTKSFEPRVSDFGLAYLALPTATPNRVSGYRAPEVTDARKVSQKADVYSFGIMLLELLTGKAPTHSSLNEEGVDLPRWVQSIVQDEWNTEVFDMELLRYQSVEEEMVNLLQLALECTTQYPDKRPSMDVVASKIEKICHPSLEKEEEKIHDDLSKDEDN* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2660 632 PANTHER INACTIVE RECEPTOR KINASE-RELATED 4 621 - -
Mtr5g2660 632 SUPERFAMILY Protein kinase-like (PK-like) 345 605 IPR011009 -
Mtr5g2660 632 SUPERFAMILY L domain-like 46 209 - -
Mtr5g2660 632 Gene3D Ribonuclease Inhibitor 26 180 IPR032675 -
Mtr5g2660 632 PANTHER OS05G0588300 PROTEIN 4 621 - -
Mtr5g2660 632 Gene3D Transferase(Phosphotransferase) domain 1 416 631 - -
Mtr5g2660 632 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Mtr5g2660 632 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Mtr5g2660 632 Gene3D Phosphorylase Kinase; domain 1 304 415 - -
Mtr5g2660 632 Pfam Protein kinase domain 345 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2660 632 ProSiteProfiles Protein kinase domain profile. 341 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2660 632 CDD STKc_IRAK 347 610 - -
Mtr5g2660 632 Gene3D Ribonuclease Inhibitor 181 227 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2660 Mtr-Chr5 34642372 34646070 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2660 24 610 Receptor kinase-like Gene Family AT1G48480 56.169 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr5g2660 Pkinase 1.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2660 - - aprc:113846223 882.478