Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2647 ATGGATGCGCAGGCAAAGAAAAAAGCATTGTTTCGTGCCAAATTGAACGCCCAGAAGAAGGACAAACGCATAGATTCTCCCCTTGTTAGGTATAATGAATTTGATCAGCCTGTTTGCCGAGTTTGTGATGTTGTTTTGAAGTCCGAGTCCTTGTGGGATGCACATCAAGTTTCTCGAAAGCATCGTGAGGCAATAACTAATCTTAAAGCTAATGCTGCTGGGTTAACTAAGCAAAGCAATGCAAAACCTGATATTCCCAAGGCTAAACCCGAGCAGCCTTCGGGCTCACAGTTCAAAATTCCCAAGAGTCCACAAGAAGTGCCTAAACCTCAGTCGTCATCAGTTCTTCCACCAGATTTTTTTGACAACAATGATGCAAAGAAGACAAGATCTGAAAAGGACTCTGTCCATTTAGTGGACTCAGATTTAGGTAGAAACATGGGGGCTTCTGCTCAAAGTTCGGTGTCAAACTCAAAAGAGAAAGATCACTTCCACGGAAATAATAATCCTACACAGTCAAAGGTTAATCAAGCAACAGTGGAGACTAAGCAGACATCAGTCAAGACTATAGATGCAGAGATCAAGCAAGGAAAAGGAGCTCTGCCTGAAGGCTTTTTTGATAATAAAGAGGCTGATTTGCGGGCACGTGGCATTAAGCTCGTTAAGCCAGATGTCAAGGACGAGTACAAGGAATTTGAGAAGTTGATTCAAGAAGACTTGCAGGAGGTGGATGATCGGATGGAAGAAGAAGAGATTGATGCTGCAGAAATGATAGAAGAAGCTGAATCTGTTGAGCAAAGGAACTTAAAGGAGAAAGTGGAAATGTTGAAAAGGAAGAGATTGGAGCTAAAGGCTTCTAAAGCAAAGCTTAGTAAATCTTCCGGGGTTGTAACCAAGGAAGCCAGACATGAAGATTCATCCAGTGATGATGAAAGTGGTGAGAACTTTGCTGTGGACTGGAGGGCACAACACTTGTGA 978 0.4274 MDAQAKKKALFRAKLNAQKKDKRIDSPLVRYNEFDQPVCRVCDVVLKSESLWDAHQVSRKHREAITNLKANAAGLTKQSNAKPDIPKAKPEQPSGSQFKIPKSPQEVPKPQSSSVLPPDFFDNNDAKKTRSEKDSVHLVDSDLGRNMGASAQSSVSNSKEKDHFHGNNNPTQSKVNQATVETKQTSVKTIDAEIKQGKGALPEGFFDNKEADLRARGIKLVKPDVKDEYKEFEKLIQEDLQEVDDRMEEEEIDAAEMIEEAESVEQRNLKEKVEMLKRKRLELKASKAKLSKSSGVVTKEARHEDSSSDDESGENFAVDWRAQHL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2647 325 PANTHER UNCHARACTERIZED 1 325 IPR040050 GO:0003676|GO:0005681|GO:0008270
Mtr5g2647 325 MobiDBLite consensus disorder prediction 168 185 - -
Mtr5g2647 325 MobiDBLite consensus disorder prediction 287 325 - -
Mtr5g2647 325 Coils Coil 233 286 - -
Mtr5g2647 325 Gene3D Classic Zinc Finger 32 70 - -
Mtr5g2647 325 SUPERFAMILY beta-beta-alpha zinc fingers 31 71 IPR036236 -
Mtr5g2647 325 Pfam Zinc-finger of C2H2 type 39 61 - -
Mtr5g2647 325 MobiDBLite consensus disorder prediction 123 140 - -
Mtr5g2647 325 MobiDBLite consensus disorder prediction 96 119 - -
Mtr5g2647 325 MobiDBLite consensus disorder prediction 296 317 - -
Mtr5g2647 325 MobiDBLite consensus disorder prediction 70 185 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2647 1 325 C2H2 Transcription Factor Family AT3G02860 54.599 2.23e-95 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2647 K13104 - gmx:100808515 437.573