Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2643 ATGCACAGGGATGTTGTCTGCCAAACTGCTATGCAGACATATATAAACTGCTCCAAGATTAAGCAATACAAATGCAACAACCGGCAGGTTCTGCATCGTCTCCCACGATGTGGATCAACATTGGATGATACATCATCATGCAGCTTTGGCAGCAGAAACTCAAATGGAGCTAACTCATACCAGTACTGCTCCATTGCTTGCAAGTACAAAGATATGTCAAGAAAGTCTGAAGATTCAATTCCTACTCGGGAATCACAAGGGGAAACTTCTGAGCCTCAAAAAAGGAAACGAAAAGGAACACCACACAGAGCTCCTTTCTTCTGA 324 0.4321 MHRDVVCQTAMQTYINCSKIKQYKCNNRQVLHRLPRCGSTLDDTSSCSFGSRNSNGANSYQYCSIACKYKDMSRKSEDSIPTRESQGETSEPQKRKRKGTPHRAPFF* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2643 107 MobiDBLite consensus disorder prediction 73 107 - -
Mtr5g2643 107 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 107 - -
Mtr5g2643 107 MobiDBLite consensus disorder prediction 39 58 - -
Mtr5g2643 107 Pfam PLATZ transcription factor 1 68 IPR006734 -
Mtr5g2643 107 MobiDBLite consensus disorder prediction 37 58 - -
Mtr5g2643 107 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 1 107 - -
Mtr5g2643 107 MobiDBLite consensus disorder prediction 73 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2643 Mtr-Chr5 34478907 34483076 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mtr5g2643 PLATZ 4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2643 - - mtr:MTR_5g077740 229.18