Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2634 ATGAACATGAACAAAAACATCATCGTACACCCTTTAACTTTCTTTACCTTATTCTTTTCCATTATCACTTTCACTCACTCCCAAACCAACGATGCTTCCATCATGCAAACCCTAAAAAACAACCTTAAACCGCCTCTTTCGCTTGGTTGGTCCGACCCGGATCCATGTAAATGGACCCACGTTTCTTGTTCCGACGACAACCGTGTAACGAGAATCCAAATCGGTCGCCAGAATCTCCATGGCACACTTCCTCAAACCCTTCAAAACCTTACCAACTTACAACACCTAGAGCTTCAATTCAACAACTTCACAGGTCCACTTCCAAGCTTAAACGGTTTAAACTCTCTTCAAGTTTTCATGGCGAGTGGTAACAGTTTTTCATCGTTTCCTAGTGATTTTTTTGCTGGTATGTCTCAGCTTGTTTCTGTTGAGATTGATGATAACCCTTTTGAGCCATGGGAGATTCCTGTGTCTTTGAAAGATGCTTCTTCTCTTCAGAATTTTTCTGCTAATAATGCTAATGTGAAGGGTAAGTTACCTGATTTTTTTAGTGATGAGGTTTTTCCTGGTTTGACCCTTTTGCATTTAGCTTTTAATAAACTTGAAGGTGTGTTGCCAAAGGGGTTTAATGGATTAAAGGTTGAGTCTTTGTGGTTGAATGGTCAGAAGAGTGATGTTAAGCTTAGTGGGTCAGTTCAGGTTTTGCAGAATATGACTTCTTTAACTGAGGTTTGGTTGCAGTCTAATGGGTTTAATGGTCCTTTGCCTGATTTAGGAGGATTGAAAAATTTGGAAGTTTTGAGTTTAAGGGATAATTCTTTTACTGGTGTTGTTCCTAGTTCGTTGGTTGGATTTAAATCACTTAAAGTTGTGAACTTGACTAATAACAAGTTTCAAGGTCCGGTACCGGTTTTTGGTGCTGGTGTTAAGGTTGATAATATTAAGGATTCTAATAGCTTTTGTTTGCCTAGTCCTGGTGATTGTGATCCTAGGGTGAATGTTCTTCTTTCGGTTGTTGGGGGTATGGGTTATCCTTTAAGGTTTGCTGAGAGTTGGAAGGGGAATGATCCTTGTGCTGATTGGATTGGGATTACTTGTAGTAATGGGAACATTAGTGTTGTTAATTTTCAAAAGTTGGGTCTTACTGGTGTGATATCTCCAGATTTTGCTAAGCTTAAATCGCTGCAAAGACTTATTCTTTCTGATAATAATCTCACTGGTTTGATTCCGAACGAGCTTACTACTTTGCCTATGCTAACTCAATTGAATGTTTCTAACAATCATCTCTTTGGGAAAGTACCGAGTTTTAGGAGCAATGTGATTGTGATTACTAGTGGGAACATTGATATAGGGAAGGATAAAAGCAGCTTGTCACCTTCGGTGTCTCCTAATGGTACCAATGCAAGTGGTGGAAATGGTGGGAGTTCGGAAAATGGCGACAGAAAGTCTTCTTCACATGTGGGCTTGATTGTGTTAGCTGTGATTGGTACTGTTTTTGTGGCATCTTTGATTGGTCTCTTGGTTTTCTGTTTGTTTAGGATGAGGCAAAAGAAGTTAAGCAGGGTGCAGAGTCCAAATGCATTAGTTATTCACCCTCGGCATTCTGGATCAGATAATGAAAGTGTGAAGATAACGGTTGCAGGTTCGAGTGTAAGTGTTGGAGGTGTGAGTGAAGCTCACACCGTACCCAACAGTGAGATGGGAGATATTCAAATGGTTGAAGCGGGAAACATGGTAATTTCAATACAGGTTCTAAGGAGCGTCACGAACAACTTCAGCGAGAAAAATATATTGGGGCAAGGAGGTTTTGGAACAGTTTATAAAGGCGAACTCCATGATGGTACGAGAATCGCAGTGAAAAGAATGATGTGTGGGGCAATAGTTGGGAAGGGTGCAGCAGAATTTCAGTCTGAAATTGCTGTTTTGACAAAGGTTCGTCACCGGCATCTTGTTGCTCTTCTTGGTTACTGCTTGGATGGGAATGAAAAGCTTCTTGTTTATGAGTACATGCCTCAGGGGACCCTAAGTAGGTATATTTTTAATTGGCCAGAGGAAGGACTCGAACCACTCGGGTGGAATAAGAGATTGGTCATCGCCTTAGATGTTGCAAGGGGTGTTGAGTACCTACATAGCTTGGCTCATCAAAGCTTCATACACAGAGACTTGAAACCTTCAAATATTCTCCTTGGAGATGATATGAGGGCAAAGGTCGCAGATTTTGGTCTCGTGCGTCTTGCTCCAGAAGGGAAAGCTTCAATTGAAACAAGAATTGCAGGAACTTTCGGATATTTGGCACCAGAATATGCAGTTACCGGCCGTGTGACAACTAAAGTTGATGTGTTTAGCTTTGGTGTAATATTGATGGAGCTTATAACCGGAAGAAAAGCACTTGACGACAGCCAACCAGAGGACAGCATGCACCTTGTAGCATGGTTCCGAAGAATGTACTTAGATAAGGACACATTCCGCAAGGCCATTGACCCTACAATTGATATCAATGAAGAAACACTTGCTAGTATTCACACTGTAGCTGAATTAGCTGGTCATTGCAGTGCGAGGGAGCCATATCAAAGGCCTGACATGGGTCATGCGGTCAATGTGCTTTCTTCTCTTGTCGAACAATGGAAGCCATCTGATACGAATGCTGAAGACATATATGGTATTGACCTTGACTTATCTTTACCACAAGCACTCAAGAAATGGCAGGCTTATGAAGGTGCAAGTCAACTTGACTCATCTTCATCTTCGCTTCTTCCAAGTTTGGATAACACACAAACAAGTATACCTAATCGCCCGTATGGATTTGCCGATTCTTTTACATCAGCGGATGGTAGATGA 2838 0.4147 MNMNKNIIVHPLTFFTLFFSIITFTHSQTNDASIMQTLKNNLKPPLSLGWSDPDPCKWTHVSCSDDNRVTRIQIGRQNLHGTLPQTLQNLTNLQHLELQFNNFTGPLPSLNGLNSLQVFMASGNSFSSFPSDFFAGMSQLVSVEIDDNPFEPWEIPVSLKDASSLQNFSANNANVKGKLPDFFSDEVFPGLTLLHLAFNKLEGVLPKGFNGLKVESLWLNGQKSDVKLSGSVQVLQNMTSLTEVWLQSNGFNGPLPDLGGLKNLEVLSLRDNSFTGVVPSSLVGFKSLKVVNLTNNKFQGPVPVFGAGVKVDNIKDSNSFCLPSPGDCDPRVNVLLSVVGGMGYPLRFAESWKGNDPCADWIGITCSNGNISVVNFQKLGLTGVISPDFAKLKSLQRLILSDNNLTGLIPNELTTLPMLTQLNVSNNHLFGKVPSFRSNVIVITSGNIDIGKDKSSLSPSVSPNGTNASGGNGGSSENGDRKSSSHVGLIVLAVIGTVFVASLIGLLVFCLFRMRQKKLSRVQSPNALVIHPRHSGSDNESVKITVAGSSVSVGGVSEAHTVPNSEMGDIQMVEAGNMVISIQVLRSVTNNFSEKNILGQGGFGTVYKGELHDGTRIAVKRMMCGAIVGKGAAEFQSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRYIFNWPEEGLEPLGWNKRLVIALDVARGVEYLHSLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDDSQPEDSMHLVAWFRRMYLDKDTFRKAIDPTIDINEETLASIHTVAELAGHCSAREPYQRPDMGHAVNVLSSLVEQWKPSDTNAEDIYGIDLDLSLPQALKKWQAYEGASQLDSSSSSLLPSLDNTQTSIPNRPYGFADSFTSADGR* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2634 945 MobiDBLite consensus disorder prediction 911 934 - -
Mtr5g2634 945 ProSitePatterns Protein kinases ATP-binding region signature. 598 630 IPR017441 GO:0005524
Mtr5g2634 945 Gene3D Phosphorylase Kinase; domain 1 553 669 - -
Mtr5g2634 945 MobiDBLite consensus disorder prediction 454 481 - -
Mtr5g2634 945 Gene3D Ribonuclease Inhibitor 330 454 IPR032675 -
Mtr5g2634 945 SUPERFAMILY Protein kinase-like (PK-like) 567 876 IPR011009 -
Mtr5g2634 945 Gene3D Ribonuclease Inhibitor 28 328 IPR032675 -
Mtr5g2634 945 ProSitePatterns Serine/Threonine protein kinases active-site signature. 717 729 IPR008271 GO:0004672|GO:0006468
Mtr5g2634 945 CDD STKc_IRAK 598 871 - -
Mtr5g2634 945 SUPERFAMILY L domain-like 45 436 - -
Mtr5g2634 945 Pfam Leucine rich repeat N-terminal domain 333 367 IPR013210 -
Mtr5g2634 945 Pfam Leucine rich repeat N-terminal domain 30 64 IPR013210 -
Mtr5g2634 945 PANTHER OSJNBA0070M12.3 PROTEIN 15 945 - -
Mtr5g2634 945 Gene3D Transferase(Phosphotransferase) domain 1 670 890 - -
Mtr5g2634 945 SMART serkin_6 592 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2634 945 Pfam Leucine rich repeat 386 429 IPR001611 GO:0005515
Mtr5g2634 945 SMART LRR_typ_2 416 438 IPR003591 -
Mtr5g2634 945 SMART LRR_typ_2 90 112 IPR003591 -
Mtr5g2634 945 SMART LRR_typ_2 392 415 IPR003591 -
Mtr5g2634 945 SMART LRR_typ_2 261 284 IPR003591 -
Mtr5g2634 945 SMART LRR_typ_2 113 136 IPR003591 -
Mtr5g2634 945 SMART LRR_typ_2 188 211 IPR003591 -
Mtr5g2634 945 Pfam Protein kinase domain 593 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2634 945 PANTHER RECEPTOR PROTEIN KINASE TMK1 15 945 - -
Mtr5g2634 945 ProSiteProfiles Protein kinase domain profile. 592 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2634 945 MobiDBLite consensus disorder prediction 911 945 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2634 Mtr-Chr5 34356054 34359859 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2634 72 873 Receptor kinase-like Gene Family AT5G07280 30.461 2.59e-82 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mtr5g2634 Pkinase 3.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2634 - K00924 aprc:113846741 1490.71