LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr5g2619	ATGTCTCAACTTTCTCTCTCTTCCTTCTTCTTCTTCTTCTTCACTCTTTCATTTTTCAGCTTCACCTTCTCAATAATCGCTTCCACCGAATTCGACTTCGGAACCTTAACACTCACAAGCCTCAAACTTCTCGGCGACGCTCATCTCAACAACGGCACCGTCACACTCACACGTGACCTCACCGTTCCATTTTCCGGCGCCGGTCAAGCATTATATTCCCGTCCAATCAGATTCCGTCAACCGGGCACCACCACTCCGGCGAGCTTCACCACTTTCTTTTCTTTCTCAGTCACCAATTTGAACCCTTCTTCCATCGGCGGTGGACTTGCCTTTATAATCTCACCGGACGATGAATCTCTTGGTGACGCTGGTGGTTATCTTGGTCTTGCCGGAAATGGGTTTGTGGCGGTTGAATTTGATACCCTTATGGATGTTGAGTTTAAGGATATTAATGGGAATCATGTTGGTGTTGATCTTAATAGTGTTGTTTCTAGTAAAGTTGGTGATTTGGATTCAATTGGGGTTGATCTTAAAAGTGGTGATAGTGTCAATGCTTGGATTGAATTTGATGGATCTAATAATGGGTTTAATGTTTGGGTTTCTTATTCTAATTTGAAGCCTAAAGATCCAATTTTGACTATGAATCTTGATATGGGCTTGTATTTGAATGATTTTATGTATGTTGGCTTTTCTGGTTCTACTCAAGGTAGTACAGAGATTCATAGGATTGAATGGTGGAGTTTTAGCTCATCTTTTATGACGGGTTCGGGTGGTTTGTCGCCTCCTCCAGCAGTTAGTATGATGAATACCACGGCGAATTCAGCAAGGTCACCGCCTCCTTCTATGGCTCCAACAATGAATTCTTCGAATGAGGAAAGAAAAGAGAGTAAGAAGAGTTGTCATAATGGGTTGTGTAAGCAGGGTTTGGGAGCTGTTGCTGGTGTTGTTACTGCTGGTGCTTTTGTTTTAGCACTTTTTGCTGGGTCTATGATTTGGTTGTATTCGAAGAAAGTGAAGCGTGTGAGTAGATTTGATTCGCTTGGATCGGAGATAATTAAAATGCCTAAGCAGTTTAGTTACAAGGAGCTTAAATCTGCTACAAAGTGTTTCAATGCTAATAGGATTATTGGTCATGGTGCATTTGGGACTGTGTATAAGGGAATTTTGACTGAGAATGGTGACATTATTGCTGTGAAGAGATGTAGTCATAGTAGTCAAGGTAAGAATGAGTTTTTATCTGAGTTGTCTATAATTGGTAGCCTTAGACATCGGAATCTTGTAAGACTTCAAGGATGGTGTCATGAGAAAGGCGAGATTTTGTTGGTGTATGATTTGATGCCTAATGGTAGTTTGGATAAGGCTTTGTTCGAGGCTAGAACGCCTCTTCCGTGGCCTCACCGCCGAAAGATTTTATTGGGTGTGGCGTCCGCTTTGGCTTACTTGCATCAAGAGTGTGAAAATCAGGTAATTCATAGAGATATTAAGACTAGTAACATAATGTTGGACGAAGGGTTCAATGCGCGTTTGGGAGATTTTGGATTAGCAAGGCAAACTGAGCATGACAAATCTCCGGATGCGACGGTGGCTGCTGGAACAATGGGGTATCTAGCACCCGAGTATCTCCTTACAGGTAAAGCCACCGACAAAACCGACGTGTTTAGTTATGGTGCTGTGGTTCTTGAGGTGGCTAGTGGGAGGAGACCAATAGAGAAAGATGCTGCTGGTGTTGGCAAGGTTGGAGTGAGTAGCAATTTGGTGGAATGGGTTTGGAGTTTACACAGGGAAGGAAGGTTGTTAGCGGCAGTTGATCCAAGGCTTGAGGGCGAGTTCGATGAAGCGGGGATGACAAGGGTACTCTTGGTTGGGTTAGCTTGCTCACACCCTGATCCTTTGGCTAGACCAACAATGAGAAGCGTGGTTCAGATGCTAGGAGGTGAAGCTGAAGTGCCAATTGTACCGAGAACGAAGCCTTCTACGGGTCTCAGTACTTCACACTCTCACCTCTTAATGAGCTTGCAAGATAGTGTATCTGACTGTGATGGTATACTCACCATCTCTACTTCCACATCAGAGAACAGCTTCAACGGTGGAGATATAGTCTGA	2103	0.4379	MSQLSLSSFFFFFFTLSFFSFTFSIIASTEFDFGTLTLTSLKLLGDAHLNNGTVTLTRDLTVPFSGAGQALYSRPIRFRQPGTTTPASFTTFFSFSVTNLNPSSIGGGLAFIISPDDESLGDAGGYLGLAGNGFVAVEFDTLMDVEFKDINGNHVGVDLNSVVSSKVGDLDSIGVDLKSGDSVNAWIEFDGSNNGFNVWVSYSNLKPKDPILTMNLDMGLYLNDFMYVGFSGSTQGSTEIHRIEWWSFSSSFMTGSGGLSPPPAVSMMNTTANSARSPPPSMAPTMNSSNEERKESKKSCHNGLCKQGLGAVAGVVTAGAFVLALFAGSMIWLYSKKVKRVSRFDSLGSEIIKMPKQFSYKELKSATKCFNANRIIGHGAFGTVYKGILTENGDIIAVKRCSHSSQGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWPHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATDKTDVFSYGAVVLEVASGRRPIEKDAAGVGKVGVSSNLVEWVWSLHREGRLLAAVDPRLEGEFDEAGMTRVLLVGLACSHPDPLARPTMRSVVQMLGGEAEVPIVPRTKPSTGLSTSHSHLLMSLQDSVSDCDGILTISTSTSENSFNGGDIV*	701

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr5g2619	700	Gene3D	Phosphorylase Kinase; domain 1	333	445	-	-
	Mtr5g2619	700	ProSitePatterns	Legume lectins beta-chain signature.	135	141	IPR019825	-
	Mtr5g2619	700	SMART	serkin_6	370	643	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr5g2619	700	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	489	501	IPR008271	GO:0004672\|GO:0006468
	Mtr5g2619	700	CDD	STKc_IRAK	376	643	-	-
	Mtr5g2619	700	ProSitePatterns	Protein kinases ATP-binding region signature.	376	399	IPR017441	GO:0005524
	Mtr5g2619	700	Pfam	Legume lectin domain	29	251	IPR001220	GO:0030246
	Mtr5g2619	700	Gene3D	Transferase(Phosphotransferase) domain 1	446	649	-	-
	Mtr5g2619	700	SUPERFAMILY	Concanavalin A-like lectins/glucanases	27	265	IPR013320	-
	Mtr5g2619	700	MobiDBLite	consensus disorder prediction	267	299	-	-
	Mtr5g2619	700	PANTHER	-	24	693	-	-
	Mtr5g2619	700	MobiDBLite	consensus disorder prediction	267	289	-	-
	Mtr5g2619	700	ProSiteProfiles	Protein kinase domain profile.	370	652	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr5g2619	700	Pfam	Protein kinase domain	371	573	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr5g2619	700	CDD	lectin_legume_LecRK_Arcelin_ConA	45	252	IPR001220	GO:0030246
	Mtr5g2619	700	PANTHER	L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2	24	693	-	-
	Mtr5g2619	700	Gene3D	-	26	257	-	-
	Mtr5g2619	700	SUPERFAMILY	Protein kinase-like (PK-like)	352	666	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr5g2619	Mtr-Chr5	34201599	34204379	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr5g2619	8	682	Receptor kinase-like Gene Family	AT3G53380	70.000	0.0	926

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Mtr5g2619		Pkinase	7.1e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr5g2619	-		-	gmx:100793157	1087.79