Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2618 ATGGTTCTATCAGAAACTGCAACCCATATGGACGCCTCTGTCCATTCAACATTCGCCTCTCGCTATGTCCGCACATCCCTTCCCAGGTTCAAGATGGGGGAGAATTCGATCCCAAAGGAAGCTGCGTATCAGATCATAAACGATGAGTTGATGCTTGATGGTAACCCTAGGCTGAATCTTGCATCATTCGTCACCACATGGATGGAACCAGAATGCGACAAACTCATCATGGCTTCAATTAACAAAAACTACGTCGACATGGATGAATATCCTGTCACCACTGAGCTCCAGAACCGTTGTGTTAATATGATAGCTCATCTTTTCAATGCACCACTGGAAGACTCAGAACCTGCAGTTGGTGTTGGCACTGTTGGCTCATCAGAGGCCATAATGTTAGCTGGATTGGCATTCAAGAGGAAGTGGCAAAACAGAAGGAAAAGTGAAGGGAAGTCTTGTGAAAATCCCAACATTGTCACTGGTGCCAATGTTCAGGTTTGCTGGGAGAAATTCGCAAGGTACTTCGAGGTGGAACTGAAAGAGGTGAAGCTGAGGGATGGATACTATGTAATGGACCCTGAAAAAGCTGCGGAAATGGTGGACGAGAACACTATCTGTGTTGCTGCTATTCTTGGTTCCACGCTAAATGGAGAATTCGAAGATGTCAAGCGCTTAAACGATCTCCTAGTTGAAAAAAATGCCGAAACTGGTTGGGACACTCCAATTCATGTGGATGCAGCAAGTGGTGGATTCATTGCACCATTTCTTTATCCAGAGCTTGTGTGGGACTTTCGTTTATCACTTGTGAAGAGTATTAATGTTAGTGGACACAAATATGGTCTAGTCTATGCTGGTATTGGTTGGATTATCTGGAGAAGCAAAGAAGACCTTCCTGAGGAACTCATTTTCCACATTAACTACCTTGGAGCTGACCAACCAACCTTCACTCTCAACTTCTCCAAAGGTTCTAGCCAAGTTATTGCTCAGTACTACCAACTGATTCGTTTGGGTTATGAGGGATATAGAAATGTGATGGAAAACTGTAGAGACAACATGATGGTGCTTAAGGATGGGCTCGAGAAAACAGAGCGGTTTGAGATTGTATCCAAAGATGAAGGCGTACCATTAGTGGCTTTCACTTTGAAGGACCACAATAACTTTAACGAATTCCAAATCTCTGATATGCTGAAGCGCCATGGTTGGATAATTCCGGCATACACCATGCCACCGGATGCAGAACACGTGACAGTGCTCCGTGTTGTGATCAGGGAGGACTTCTCGCGCACCTTTGCAGAGCGTCTTGTCATTGACATCACCAGGGTGATCCACGAGCTGGATTTGGTTCCTTCGAGGGTAGTCAGTACAAACACCATAACAGTTACTGGTGGAGAAGAAGATGCAGACAATGATGGCACAGTAACGATTGCTAACCAGAGTGTACTGGAGACTCAAAGGAAAATCACTACAGCTTGGAAGAAATTTGTGATGAACAGGAAGAAGACAAATGGTGTTTGTTAG 1515 0.4469 MVLSETATHMDASVHSTFASRYVRTSLPRFKMGENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEDSEPAVGVGTVGSSEAIMLAGLAFKRKWQNRRKSEGKSCENPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEKAAEMVDENTICVAAILGSTLNGEFEDVKRLNDLLVEKNAETGWDTPIHVDAASGGFIAPFLYPELVWDFRLSLVKSINVSGHKYGLVYAGIGWIIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNVMENCRDNMMVLKDGLEKTERFEIVSKDEGVPLVAFTLKDHNNFNEFQISDMLKRHGWIIPAYTMPPDAEHVTVLRVVIREDFSRTFAERLVIDITRVIHELDLVPSRVVSTNTITVTGGEEDADNDGTVTIANQSVLETQRKITTAWKKFVMNRKKTNGVC* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2618 504 PANTHER GLUTAMATE DECARBOXYLASE 1 504 - -
Mtr5g2618 504 CDD DOPA_deC_like 59 439 - -
Mtr5g2618 504 Gene3D - 1 65 - -
Mtr5g2618 504 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Mtr5g2618 504 PANTHER GLUTAMATE DECARBOXYLASE 1 504 IPR010107 GO:0004351|GO:0006536|GO:0030170
Mtr5g2618 504 Pfam Pyridoxal-dependent decarboxylase conserved domain 37 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Mtr5g2618 504 Gene3D - 361 448 - -
Mtr5g2618 504 SUPERFAMILY PLP-dependent transferases 14 444 IPR015424 -
Mtr5g2618 504 Gene3D - 66 360 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2618 Mtr-Chr5 34195046 34200583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2618 1 504 Calmodulin-binding Proteins AT5G17330 81.944 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2618 K01580 - gmx:100791696 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1963 3 32683066 32687974 Mtr5g2618 5 34195046 34200583 PCT