Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2617 ATGGCACCAAAACCTTTCCACTTTCCCGCCAAACGAACAACCGCCATTTTCCTTCTAACCGCCGCCACCGCCGCCATAGCTACTGCCAACTCTGACGACCTCTCCTCCCAAATCCATGGCATCGTCCGCACCGCTCGCGCCGTCTCCACTGTTACTTCCACTGTCGTAGATTACGAATTCTCGCTCCGCGGCCTTCAAAAACACTCCGATCAGTATCGTCATACGATTTCCCAGGTTCATCAACGTTCCGCGAAGAGGTTTCTGAAGCTATGTGAAGCTAACAAAGGGTTTTATGTGAAAGCTGGACAATTCATTGCTTCGCAAAAAGTGATTCCGAGAGAGTACTCTTCAACTTTATCAGTGTTACAAGATCAGGTTTCTCCTCTTCCTTTTGAAGTCATTGAGAAAGTGTTGAAAGAAAATCTCGGACCGGATTTCTCTGAGAAATTTTTGTCCATTGATGAACGACCTATTGGTGCTGCATCTATTGCTCAAGTTCACCATGCAGTACTAAAAAGTGGTCAAGAAGTAGCAATCAAGGTGCAATATCCTTGGATAGAGAAGCAGATGCATTTCGATACAAGAACAATGTATTTCCTATCAAAAACTATTGGATGGCTATACCCTCAATACAGGTTTGGGTGGCTACCATTAGCATTTGCCAAAACTGTGTCTTCAGAACTTGATTTTGTTCAGGAGGCAAGGAATTCTGAGAGAGCAGCCAAAAATTTCAGAAACAACAAAATGGTCAGAATTCCTCATGTATTCTGGGAGTTGACAACAAAGCAAGTCCTAACCATGCAATTTTATGCAGGACACAAGATTGATGACTTGGATTTTCTGAATCAGATTGGGGTTGATCCAGAAAAGGTAGCAAAATCACTGTTTGAGCTGTTTGCCGAAATGATATTTGTGCATGGTTACATGCATGGTGATCCACATCCTGGTAATATACTGGTTTCTCCTGAAGGTCGCAATGGTTTCTCTTTGGTTCTTCTAGATCATGCAGTCTACAGGGAATTAGATGAAGAATTTAGAAAAGACTTTTGTCAGCTATGGGAAGCTTTGGTTCTAAAGGACTCAAAGAAAACAATGTGGTTTGGCGAGCGATTTGGTGCTGGGAAGTATTCTCGATACTTGCCCATTATTTTCACTGGAACAACTATTGAAAGCAAATATTCTTCTGGAATGTCACTCAAGGAAAAAGAGAGTATGAAACATGAATTGAAATCTCTGTTGTTTGAGGACTTATCTTCATTCATGGAGTCTATGCCACCAGATTTTATTGCTATATTACGCGTAGATGCACTGCTAAGGTCTACCATTAGAAAGATGGATGTCTCACGGCTCATCAGATTGTTAACTTACACCAAATATGCAGTATATGGCCGTCTCTGTCCAAAATTGGATGGTGAATTGTGTAAAATGCCCGGAACAAACGTTTATTTTGCTGTGAAAGCTGTTTTCTTAAGTTCCATATCAACGCTAAAATATATTCGCATCCTAATCAAGGTCCTTTTTGGGGCCATATTTGACAGTACCCCTTGGCAGCAGAAAGTGAAGAATGTACAAAATTACTTGTATCGCAAGATTGGTAGTAGTGACTTCTGGGGCATTCTGGTCCATTCCGCCTTTCTTCTTTTTTGTATTCATCCTAATGCTTTGTTTTGA 1671 0.4135 MAPKPFHFPAKRTTAIFLLTAATAAIATANSDDLSSQIHGIVRTARAVSTVTSTVVDYEFSLRGLQKHSDQYRHTISQVHQRSAKRFLKLCEANKGFYVKAGQFIASQKVIPREYSSTLSVLQDQVSPLPFEVIEKVLKENLGPDFSEKFLSIDERPIGAASIAQVHHAVLKSGQEVAIKVQYPWIEKQMHFDTRTMYFLSKTIGWLYPQYRFGWLPLAFAKTVSSELDFVQEARNSERAAKNFRNNKMVRIPHVFWELTTKQVLTMQFYAGHKIDDLDFLNQIGVDPEKVAKSLFELFAEMIFVHGYMHGDPHPGNILVSPEGRNGFSLVLLDHAVYRELDEEFRKDFCQLWEALVLKDSKKTMWFGERFGAGKYSRYLPIIFTGTTIESKYSSGMSLKEKESMKHELKSLLFEDLSSFMESMPPDFIAILRVDALLRSTIRKMDVSRLIRLLTYTKYAVYGRLCPKLDGELCKMPGTNVYFAVKAVFLSSISTLKYIRILIKVLFGAIFDSTPWQQKVKNVQNYLYRKIGSSDFWGILVHSAFLLFCIHPNALF* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2617 556 PANTHER AARF DOMAIN CONTAINING KINASE 1 (PREDICTED) 24 499 - -
Mtr5g2617 556 SUPERFAMILY Protein kinase-like (PK-like) 123 360 IPR011009 -
Mtr5g2617 556 Pfam ABC1 atypical kinase-like domain 122 364 IPR004147 -
Mtr5g2617 556 PANTHER ABC1 FAMILY PROTEIN 24 499 - -
Mtr5g2617 556 Gene3D Transferase(Phosphotransferase) domain 1 146 344 - -
Mtr5g2617 556 CDD ADCK1-like 121 363 IPR045307 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2617 Mtr-Chr5 34183363 34192288 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2617 K08869 - gmx:100786615 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3583 7 52873704 52878452 Mtr5g2617 5 34183363 34192288 PCT