Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2606 ATGGCACCTGTTTCATTGCCTCCAGGTTTCAGGTTCCACCCTACAGATGAAGAACTTGTTGCTTATTATCTAAATAGGAAGATTAATGGCCATAAGATTGAATTGGAGATCATAGCTGAAGTTGATCTCTATAAGTGTGAACCGTGGGACTTGCCAGGGAAATCATTGCTACCAGGGAATGATATGGAGTGGTATTTCTTTAGCCCTCGTGATAGGAAGTACCCGAATGGATCTAGAACGAATCGTGCAACCAAATCTGGATATTGGAAGGCAACTGGGAAGGATCGAAAGGTGAATTCTCAAGCTCGAGCAGTAGGGGTGAAGAAAACCCTAGTTTACTATCGAGGAAGAGCACCCCATGGCTCTCGTACAAATTGGGTTATGCATGAATATCGACTTGATGAGAGGGAATGTGAAACCACTCCTAGTTTGCAGGATGCATATGCTCTTTGCCGTGTGATCAAGAAGAGTACAGTGATTGTGCCAAAAGTTGGAGGACAATATGGTAATATTACAAGCGACCAATCACCAAGAGTTGAGCTATACTCTGAAAGAAGGGGTGAAGATTTAGATAGTTCAAATTATTTGATGCAAATGAAGGATTGTTCACCACACAATATGGTAAATGAGACTTCTCTCAATATCAATGGTACATCAAGGGATCATGGAAATTGGTTGCAATTCTCATCTCAAGACCCATTATTTAGTCTTCCAACTTCTTCTTCATTTCCTAATTATGGAGCCATAACATACCCTCCATCCAAGGTGGATATTGCACTAGAGTGTGCAAGGATGCAACATAGGTTTGCTATGCCTCCATTGGAGGTGGAGGAATTTCCTCAAGTTGGAATACCTCACCAGACACAACAAGGAAGCAGAACTAGAAATGATATCATGCAGGGAATTCTTTCACTTACTCATGCTTCTCAGGGATTGATGAACCAGTCCAGTTATTCACAAGCCTTGGATCACAATGACAATTATGCTCCTTATGAAGATGATTTTACTTTCATGGTTGGCACTAACTACAATCACATAAATGATATGAGCTCCATGGGATATGTTGACAAAACTTGGGAGGATTTGAACACAAGATCTATAGAGATAGGTGATTTAGAGGATCAAGAGTCAAAGGCCAATAGGGTGGTAGAGAATTTGAGATGGATTGGAATGCCAAGAGAAGATTTTGAAAAGATGGAAGAACAAAATGTTGTCCCAATCGAGGATATTTCATGCTACCAAACATTAAGGGAACACAATGGCATGCAAGAATATGAGCGGCACAATAACAACGTTGAACAAAATGACAATGATGTCGATGAATTCTCATGGGGATTCATCAATGATGGTGACCCCAATGATAATTTTATAGAAGATGGTAACATGGACGGTTACTCAAATTCTCCAAGCTTTGAGATCATTGAGGAAACAAAGGTTAGTCATAGAATGTTGGTTTCAACTCAACAAGTAGCCATGACATTATTTCACCAAGTTGTTCCTTCACAAACACTTCAAATTCAACTCAATCCAATGATGCCAAACAATCCAAACTCTAAAGAGAATGTAGATGCAATTATGATGATAATGGAGAATCAAGGATCTTTCTTTAGGAAGTTCAAGGCCTATGTGATGGGGAAGTGGAACTTATTCAATCCATCAAAGGAAATAGCAAGTTTGGTTGTATTTGTATTTGCACTTCTTGTGATGCATCGTGTTTATTTGGAGGAAGAAGTGGAAATATGCAAACCAAACCCAAAAAATGTGAAAGAGAAAAGAATGAGAGAATCACAAGAGAGAGTCAAATGGAATGAATCAAAAGAGGTTTGGTTTGTTGGTGTTAAATGTGAGAAAGGATTAAGTGTGGCCTTTAAGGAAATAGGCATTTTCCTCACCATATTTTTGGCGCTTTGTACCACATGGGCTAGCCATGGCTAA 1935 0.3943 MAPVSLPPGFRFHPTDEELVAYYLNRKINGHKIELEIIAEVDLYKCEPWDLPGKSLLPGNDMEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQARAVGVKKTLVYYRGRAPHGSRTNWVMHEYRLDERECETTPSLQDAYALCRVIKKSTVIVPKVGGQYGNITSDQSPRVELYSERRGEDLDSSNYLMQMKDCSPHNMVNETSLNINGTSRDHGNWLQFSSQDPLFSLPTSSSFPNYGAITYPPSKVDIALECARMQHRFAMPPLEVEEFPQVGIPHQTQQGSRTRNDIMQGILSLTHASQGLMNQSSYSQALDHNDNYAPYEDDFTFMVGTNYNHINDMSSMGYVDKTWEDLNTRSIEIGDLEDQESKANRVVENLRWIGMPREDFEKMEEQNVVPIEDISCYQTLREHNGMQEYERHNNNVEQNDNDVDEFSWGFINDGDPNDNFIEDGNMDGYSNSPSFEIIEETKVSHRMLVSTQQVAMTLFHQVVPSQTLQIQLNPMMPNNPNSKENVDAIMMIMENQGSFFRKFKAYVMGKWNLFNPSKEIASLVVFVFALLVMHRVYLEEEVEICKPNPKNVKEKRMRESQERVKWNESKEVWFVGVKCEKGLSVAFKEIGIFLTIFLALCTTWASHG* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2606 644 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Mtr5g2606 644 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 367 - -
Mtr5g2606 644 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Mtr5g2606 644 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 367 - -
Mtr5g2606 644 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Mtr5g2606 644 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2606 Mtr-Chr5 34088411 34093540 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2606 1 573 NAC Transcription Factor Family AT1G65910 43.551 1.63e-145 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr5g2606 NAM 2.2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2606 - - gmx:100809019 865.144