Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2605 ATGGCAGAATCACTCCTCTTTGGCGTGGCAGAGTCATTCATTGAAAAACTTGCATCCGTTGCTGTTGAAAAAGCTTCTCTAACGCTCGGTGTCTACGACAATCTTCAAGAAATCAAAAACACTGTCTCACTCATCAAAGCCGTGTTGTTGGACGCTGAACAAACGCAATGGCAGAACCATGAGCTGCGTGAATGGTTGAAACAGATTAAGCGGGTCTTCTATGATGCCGAAGATGTAATCGATGATTTTGAGTGCGAGGCCTTGCGAAAGCACATCATCAACACTTCAGGTAGCATCAGAAGGAAGGTAAAACGTTTCTTCTCAAATTCTAATCCTCTTGTTTACCGCCTTAAAATGGTGCATCAAATCAAACATATCAAAGAGAGATTTGATAAGGTTGCTGCTGATAGGCTTAAGTTTGGCCTTCAAATCAATGATAGTGATAACCGTGTTGTAAAAAGACGTGAATTGACACATTCATATGTGAATGATTCTGATGTGATAGGAAGAAAACATGATAAACAAAAAATCATTAATCAGTTATTGCTAGATAGTGGTGATAGTAATAGTCTCTCTGTTATTCCTATTGTTGGAATTGGAGGATTAGGAAAAACTACACTTTCAAAGGCAGTGTTTAATGATAAGAGTTTAGATGAGACTTTTTCATTGAAGATGTGGGTTTGTGTCTCTGATGATTTTGGACTTAAGAATCTGCTTCTTAAAATCCTAAATGCAGCTAGTGTTAGTGGTTCTGCTACTGGTCCTAACCCAATTCACCAAGCGAACTATACAAACCATGATTTGAATCAGCTACAAAATCATCTGAGAAATGAGATTGCTGGTAAAAAGTTCTTGCTCGTCTTGGACGATGTATGGAACCAGGATCGTGTCAAATGGGTTGAGTTGAAGAATTTAATACAAGTAGGTGCTGAAGGAAGTAAAGTCTTAGTGACTACACGTAGCCACTCAATTGCCAAAATGATGGGCACCAACACATCATACATTTTGGAATTGAAAGGTCTTTCTCCGGAGGATTCCTTGTCTGTATTTATCAAATGGGCTTTTAAAGAGGGAGAAGAGAAAAACTATCCAGAATTGATGAAGATTGGGAAAGAAATTGTACAAAAATGTGGAGGGCTTCCTTTGGCCCTAAGAACATCGGGGAGTTCTCTATTCCTAAAAGTTGATGTGGAAGAGTGGAAGTTTATCAGAGACAGTGAAATTTGGAATTTACCTCAAAAAGAAGATGACATTTTGCCTGCTATCAAATTAAGTTACGATCAGTTACCTTCTTATTTAAAACGATGTTTTACTTGCTTCTCCCTCTTTCAAAAGGACTTTACATTTACTAATATGGATGTTAGGATGCTTTGGGAGGTGCTTGGTGTTCTTCTGCCACCAAACAGGGGTAAAACCTTGGAAGGTACTAGCATTCAGTTACTGCAAGAGCTTTGGTCAAGATCATTTCTTCAAGATTTTGTAGACTTTGGTGGTGGTATTTGTACATTTAAATTGCATGATTTAGTGCATGATCTTGCAGTGTATGTTGCAAGAGATGAGTTTCAATTGATTGAATTTCATAATGAAAATATACTCGAGAATGTCCTTCATCTGTCATTTATTAAAAATGATTTGCTTGGCGTAACACCAGTTCCTACTGGTCTGAGAACTATGCTATTTCCTGAGGAAGCCAACGATAAAGCTTTTTTAAAAACTTTGGCGTCAAGGTGCAAATTCTTACGGCTTTTACAGTTAGCTGATTCTAAATATGAGAGTTTGCCCCGCTCTATTGGCAAATTAAAACATTTGAGATATCTCAATCTTAAGAATAGTAAAGAATTGAAGAGCCTCCCTAATTCACTGTGCAAACTCCAGAATCTGCATACTTTGGATCTCGATGGATGCATAGAGCTTCAAACATTACCCAATGGAATAGGAAATTTGATCAGCCTTCGGCAGCTAGTCATAACTACAAAGCAATATACTTTACCAGAAAAAGAGATTGCAAAGTTGACTTCTTTAGAAAGGTTTGATGTCACATATTGTGACAATCTAGAGACCTTGCTGTTTGAAGGAATACAACTTTCTAATCTGAAGTCACTGTATATACATTCTTGTGGGAATCTAAAGTCTATGCCACTTCATGTTATTCCCAACTTAGAGTGGTTGTTCATTACTAATTGCCATAAGTTGAAATTGTCATTCCACAATGACAACCAAATCCCAAAGTTTAAGCTGAAGTTGCTAACTCTTCGATCTTTGCCACAACTTGTGAGTATTCCTAAATGGTTGCAAGAATGTGCGGATACATTACAGACCTTGGCAATTGTTGACTGTGAAAATATTGATGAGCTTCCTGAGTGGTTATCAACTCTGATTTGTCTCAATAAACTTGTAATTGTAAATTGCCCGAAATTGCTTTCGCTCCCCGATGACATAGATTGCCTTCCAAAGCTTGAAGATTTATCAATTTATGATTGTCCTGAATTATGTAGAAGATACCAGGCAGGAGTTGGACGTGATTGGCACAAGATATCACACATCAAACAAGTGAAATTCCATTGTCTTTAG 2571 0.3765 MAESLLFGVAESFIEKLASVAVEKASLTLGVYDNLQEIKNTVSLIKAVLLDAEQTQWQNHELREWLKQIKRVFYDAEDVIDDFECEALRKHIINTSGSIRRKVKRFFSNSNPLVYRLKMVHQIKHIKERFDKVAADRLKFGLQINDSDNRVVKRRELTHSYVNDSDVIGRKHDKQKIINQLLLDSGDSNSLSVIPIVGIGGLGKTTLSKAVFNDKSLDETFSLKMWVCVSDDFGLKNLLLKILNAASVSGSATGPNPIHQANYTNHDLNQLQNHLRNEIAGKKFLLVLDDVWNQDRVKWVELKNLIQVGAEGSKVLVTTRSHSIAKMMGTNTSYILELKGLSPEDSLSVFIKWAFKEGEEKNYPELMKIGKEIVQKCGGLPLALRTSGSSLFLKVDVEEWKFIRDSEIWNLPQKEDDILPAIKLSYDQLPSYLKRCFTCFSLFQKDFTFTNMDVRMLWEVLGVLLPPNRGKTLEGTSIQLLQELWSRSFLQDFVDFGGGICTFKLHDLVHDLAVYVARDEFQLIEFHNENILENVLHLSFIKNDLLGVTPVPTGLRTMLFPEEANDKAFLKTLASRCKFLRLLQLADSKYESLPRSIGKLKHLRYLNLKNSKELKSLPNSLCKLQNLHTLDLDGCIELQTLPNGIGNLISLRQLVITTKQYTLPEKEIAKLTSLERFDVTYCDNLETLLFEGIQLSNLKSLYIHSCGNLKSMPLHVIPNLEWLFITNCHKLKLSFHNDNQIPKFKLKLLTLRSLPQLVSIPKWLQECADTLQTLAIVDCENIDELPEWLSTLICLNKLVIVNCPKLLSLPDDIDCLPKLEDLSIYDCPELCRRYQAGVGRDWHKISHIKQVKFHCL* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2605 856 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 439 IPR027417 -
Mtr5g2605 856 Pfam NB-ARC domain 171 427 IPR002182 GO:0043531
Mtr5g2605 856 Gene3D - 420 515 IPR036388 -
Mtr5g2605 856 Gene3D - 148 336 IPR027417 -
Mtr5g2605 856 PANTHER OS08G0543100 PROTEIN 27 834 - -
Mtr5g2605 856 PRINTS Disease resistance protein signature 193 208 - -
Mtr5g2605 856 PRINTS Disease resistance protein signature 278 292 - -
Mtr5g2605 856 PRINTS Disease resistance protein signature 377 391 - -
Mtr5g2605 856 PRINTS Disease resistance protein signature 622 638 - -
Mtr5g2605 856 CDD RX-CC_like 8 129 IPR038005 -
Mtr5g2605 856 Gene3D - 10 124 - -
Mtr5g2605 856 Pfam Rx N-terminal domain 10 98 IPR041118 -
Mtr5g2605 856 PANTHER DISEASE RESISTANCE PROTEIN RP 27 834 IPR044974 GO:0006952
Mtr5g2605 856 SUPERFAMILY L domain-like 504 844 - -
Mtr5g2605 856 Gene3D Ribonuclease Inhibitor 552 849 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2605 Mtr-Chr5 34084202 34086772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2605 175 799 WRKY Transcription Factor Family AT5G45050 25.994 7.53e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2605 - - mtr:MTR_7g078640 1138.25