Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2602 ATGACTTCATCACCATTGTTGTTCACAGTGCGGAGGTGCCAACCAGAGTTGGTGCCACCAGTTGCACCCACTCCTCGCGAAGTTAAACTATTATCTGATATAGATGATCAAGAAGGTTTGCGTTTCAATGTTCCTGTCATATTTATCTATCGTCGCGAACCATCAATGGCAGAGAAAGACCCTATTAAGGTTCTTAGACATGCACTCTCACGAACACTTGTGTATTACTACCCATTTGCGGGAAGGATTAGGGAGGGTGCTAGGCGCAAGTTGATGGTGGATTGTACTGGTGAGGGTGTCGTGTTCATTGAAGCTGAAGCTGATGTAACACTTGATCAATTTGGTGATGCTCTGCATCCTCCATTCCCTTGCTTCCAACAACTCTTATACGATGTTCCAGGCTCAGAACATATTATTGACCGTCCCATTCGACTCATACAGGTCACACGTCTCAAGTGTGGTGGTTTCATATTGGCCTTGAGTGTGAACCATACAATGGGTGATGCAGCTGGTTTGAGACAATTCATGACTGCATGGGCAGAAATGGCTCGAGGAGCAAATCAACCTTCCATTCAACCTGTATGGAATAGGGAGATTCTAATGGCAAGAGACCCTCCATGTATTACATGCAACCATCGTGAATACGAACAAATACTTTCGCCAAATACCTACATCAAAGAAGAAGATACTACTATCGTAGTCCATCAATCTTTCTTCTTCACACCTGCTCACATAGCTGCGATTCGTTGCTTGGTTCCAATTCACCTTCATCATTGCACTACATTTGATCTTATCAGTGCATGTTATTGGTGCTGCCGCACAAAAGCATTGCAGATAGAGCCAGATGAAGAGGTACGAATGATGTGCATCGTTAATGCACGTTCCAGGTTTAGTGCTAACCCTTCTTTGTTTATTGGATATTACGGTAATTGTATTGCTTTCTCGGCGGCTGTCACCACCGCAAAGGAGCTTTGTGGAAACCAATTAGGTTATGCAGTGGAGTTGATAAGAAAAGCAAAAACTCAAGTTACAGAGGAATACATGCATTCTTTAGCAGATTGTATGGTTATTAAGGAACGATGTTTATTTACAACCGGAAGAACTTGTATGGTGTCAGATTGGACTCGTGCTAATTTATCAGAAGTGAATTTCGGATGGGGTGAAACAATGTATGGTGGAGTAGTAAAAGGTGGAATTGGATCTTATCTTGGAGGAACCTATATTGTCCCGCATAAGAATGCAAAAGGAGAAGAAGGGTTAATATTTCCAATTTGCTTGCCCCCTGAAGATATGAAGAGGTTTGCTAAAGAGTTAGATGATATGCTTGGTAACCAAAATTGTCCTACAATGAGTGGTCCTAGTTTCATCTTGTCTACCTTATAG 1383 0.423 MTSSPLLFTVRRCQPELVPPVAPTPREVKLLSDIDDQEGLRFNVPVIFIYRREPSMAEKDPIKVLRHALSRTLVYYYPFAGRIREGARRKLMVDCTGEGVVFIEAEADVTLDQFGDALHPPFPCFQQLLYDVPGSEHIIDRPIRLIQVTRLKCGGFILALSVNHTMGDAAGLRQFMTAWAEMARGANQPSIQPVWNREILMARDPPCITCNHREYEQILSPNTYIKEEDTTIVVHQSFFFTPAHIAAIRCLVPIHLHHCTTFDLISACYWCCRTKALQIEPDEEVRMMCIVNARSRFSANPSLFIGYYGNCIAFSAAVTTAKELCGNQLGYAVELIRKAKTQVTEEYMHSLADCMVIKERCLFTTGRTCMVSDWTRANLSEVNFGWGETMYGGVVKGGIGSYLGGTYIVPHKNAKGEEGLIFPICLPPEDMKRFAKELDDMLGNQNCPTMSGPSFILSTL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2602 460 Pfam Transferase family 13 440 - -
Mtr5g2602 460 Gene3D - 8 216 IPR023213 -
Mtr5g2602 460 PANTHER ALCOHOL ACYLTRANSFERASE 8 444 - -
Mtr5g2602 460 Gene3D - 217 438 IPR023213 -
Mtr5g2602 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2602 Mtr-Chr5 34031008 34034245 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2602 41 438 Monolignol Biosynthesis Gene Families AT5G48930 28.986 3.38e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2602 K19861 - mtr:MTR_7g114490 700.279