Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2576 ATGTTTTATAACTGGTATGGTTGTTCACATGGATTTGCCGGTAGAAAGAGCCGGGTTGTTAGGAATGTTAAAGGTGAAATTGTGCAACAAACATTTCTTTGCCATAGAGAGGGTAATAGGAGTGAGAGGAATAGAAATCCTGATGTTCAGAAAAGAGAGCTTAAACCTATTAGTCGGTGTGGTTGCGAAGCAAAAATTCAAGTACATATTGATTTCGATAGCGGGCGTTGGTACATAAAATTTTTCGATGATGTTCACAATCATAGTTTTTTGGCTGACAAGTATGAGTGGATGCTGCCTGCACACATGAAGATGACCAAATATGAAAAATATCAAATGAATACAATGAGGAAATATGGCATTCCAACGTCATGGATTTATGGTTATTTTGCTACACAGGCTGGTGGTTTTGAAAATGTAGGCTATACAAGGAGAGACATGTACAATGAGCAATTGAAGGGGACAGGAAGCAATAGTTCTAATGCTGATTGTGCAATTGAATTCTTGAAGGCAATGTGTGCTAGGGATGATATGATGTACTGGAGGCACACTGTCAATCAGGATGGAACCCTTCGACACTTGTTTTGGTGTGATGGAATTAGTCGTATGGACTACTCGGTGTTTGGTGATATTTTGGCCTTTCAAACAAAATAA 654 0.3884 MFYNWYGCSHGFAGRKSRVVRNVKGEIVQQTFLCHREGNRSERNRNPDVQKRELKPISRCGCEAKIQVHIDFDSGRWYIKFFDDVHNHSFLADKYEWMLPAHMKMTKYEKYQMNTMRKYGIPTSWIYGYFATQAGGFENVGYTRRDMYNEQLKGTGSNSSNADCAIEFLKAMCARDDMMYWRHTVNQDGTLRHLFWCDGISRMDYSVFGDILAFQTK* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2576 217 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 217 IPR031052 GO:0006355
Mtr5g2576 217 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 2 217 - -
Mtr5g2576 217 Pfam FAR1 DNA-binding domain 2 91 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2576 Mtr-Chr5 33696171 33698452 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr5g2576 FAR1 1.5e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2576 - - mtr:MTR_5g076070 471.085